Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1000 ATGGAGTGTGACGGCGTCGTTTCTGGGACGAGCATGGCAGAGGATTCCGAAGAGGTTCATGTTTTGGCCGTCGATGACAGCCTCGTTGATCGCAAGGTCATTGAGCGCTTGCTCAAAGTCTTAGCCTGTAAAGTGACAGCTGTGGATAGTGGAATCAGAGCGCTTCAGTACCTTGGACTAGACGAACACAGAATGCACTCTCAATTTGATGATGGTTTTCAGGGGTTGAAGGTGGATCTAATTATCACGGACTACTGCATGCCCGGAATGACCGGTTATGAGCTTCTCAAGAAAATCAAGGAATCGTCTACTTTCAGAGAAATTCCTGTCGTGATTATGTCCTCTGAAAACATCTTGCCACGCATAGACAGATGTTTGGAGGAAGGTGCAGAGGATTTCATAGTGAAGCCAGTGAAGTTATCTGATGTGAAGCGTTTGAAGGATTACATGACGACAAGGGATGATCGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGCAGGATCAACAAAAGGAAGCTACCGGACTCCCCTGATGTGTCCTCATCTCCACCGTCCGTTTCCTCACCGGAACTCTCATCATCACCGTCTGTTTCTCCATCACCATCACCTTCCCCTTCATCTTCACCCTCCATGATTGATTCTCCAATCAGACGGCTCAAAATGACCGGCACCGATTGA 684 0.4898 MECDGVVSGTSMAEDSEEVHVLAVDDSLVDRKVIERLLKVLACKVTAVDSGIRALQYLGLDEHRMHSQFDDGFQGLKVDLIITDYCMPGMTGYELLKKIKESSTFREIPVVIMSSENILPRIDRCLEEGAEDFIVKPVKLSDVKRLKDYMTTRDDRGGGGGGGGGGGGRINKRKLPDSPDVSSSPPSVSSPELSSSPSVSPSPSPSPSSSPSMIDSPIRRLKMTGTD* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1000 227 MobiDBLite consensus disorder prediction 177 197 - -
Dod04g1000 227 PANTHER TWO-COMPONENT RESPONSE REGULATOR 12 226 IPR045279 GO:0009736
Dod04g1000 227 SUPERFAMILY CheY-like 19 145 IPR011006 -
Dod04g1000 227 SMART REC_2 19 150 IPR001789 GO:0000160
Dod04g1000 227 ProSiteProfiles Response regulatory domain profile. 20 151 IPR001789 GO:0000160
Dod04g1000 227 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR3-RELATED 12 226 - -
Dod04g1000 227 MobiDBLite consensus disorder prediction 151 227 - -
Dod04g1000 227 CDD REC_typeA_ARR 21 146 - -
Dod04g1000 227 Gene3D - 19 157 - -
Dod04g1000 227 Pfam Response regulator receiver domain 21 143 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1000 Dod-Chr4 29140057 29141317 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1000 15 219 Response Regulator Gene Family AT1G59940 59.024 7.14e-75 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dod04g1000 Response_reg 7.1e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1000 K14492 - gmx:100779833 253.447