Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0998 ATGGTTTTCGCGCGAGGAGCAGAGGCACGTCAGAAAGCAAAAAGAGAGAGAAGGGAGAGAAGAGAGACAACATTAACAAACACACACAAGAGACAGACACAGTTGTTTCCTTTCGATCTGTTGGAAGTTCGCAAAGGCCTCTCGTCACATTCACAACAAACAAGAACAACAGCAACAAGGAGAAGCCCCAACTCCGTCAAGGAAGAACACAACACTACTCTCTCTCTAAAACCAGTTCATACCACCAACAGGTCTACAACATCCCAAAGTCCCCTTCAGTCAATCATCTCATTCATTCAATTAATGGTGTATGAGGCTTTGAAGAATTTTTTGCTGCTGAGAGAGGCTGATATAGCAGGTCTAGTTGAGGCTGCAGGATCAAGATCCACCTCATTGGAGCTTGTTGGGCAGGGATCATTTGGCGACGTCTACAAAGGTCTATATCTCATGGCAAAAGAGGGAAGTTGCACTGGTGATGTTGAAACGGGTTCAAGAAGTAGCTTTATTGAAGTAGCCATGGATGTTGAGGAAAGAGAGCATGAAGAAGAAGAAAAAGAAGATAACTCTACAGAGGAGGAACACGTAGAAGACATTGAAGAAGCAGATGAAGAAGAGAAAGGGGAGTATGCTGCTAGGTTCTGCTCTGGGCTTCAATGTAATCAGCAATTTGAGTGCCTTGGGTATGAAGCTCTAGCTGATAAAAAGCGAAAAGCAATAGCAGGCTGCCTCCGTGAAGAAACTTCTTTTAAGAAGGCAAGGGAAGATGCTATTTTTGGGGCAAGCATTGATGAGATAATGGAAGTAATGAACTTTGACATGCGCAGGAGATCAAGAAAGCCAAAAAAAAGAGGCAGACGAAAAGGATCAAAGAATAAACTCAACCCTCAACTAACTCGAATGCTAGGTGATGCCACAATTCACTTGGTATCCGGCCGTTATGACCAGAGTATACATGTCTTGCATGAAGTTATTAGGCTGGCACCAAATTGTCCTGACGCATATCACTGCCTTGGACGTGTCTATACGGAGCTTAAGGATTATAAAAGAGCTATAGATTTCTACATGATTTATGCTCATATGGCTCCAAAGGATTCAATGACTTGGATATGGCTTTTTACCCAGTCCATAGGCATTGGTCAAGCCATTTATTGTTTTTCAAAGGCTGTAGCAGCTGATCCTGAGAACAGGCATCTTAGACATCATCTTGCTTTGCTTTATGTTCATCTTGGAAATTATCAAAAAGCAGCTGCCACATATGAACAATTACATCAACTATGTCCAGAGGACTTCGATGCCCTAAAAGAAGCAGCAAAGTTTTACCGCAAATGTGGTCGAGTGGAATGGTCAGTCCACATTCTTGAGGACTATCTTAAGGCTCAACCAGATGAAGTGAATGCAAGTGTAGTTGATCTATTGGCTGCTATACTCATGGAAACTAAGGCCCATGACAGAGCTCTTCAGCATATTGAGCATGCTCAAGTGATAAATTCTGGAAAAGAATTACCTTTGAATTTGAAAATAAAAGCTGGAATCTGTCATGTTCATCTTGGCAACTTGGAGATGGCTCAGGTTTTATTTAATGATTTGAAACCAGAATGTGCAAGTGAACATGATGGCTTGGTCACTGAAGTTGCAGACTCATTAATGAATCTTGGGCATTACAATTCTGCGTTGAATTATTATCTGATGTTAGATGGTAACAGTGGAAGTGAAAATGGTCTCCTGCATCTGAAAATTGCTAGATGTTATCTATCCTTGAAAGAAAAAGTACAGGCAATCCTTTTTTTTTCGAAAGCCCTAGAAACACTACCAGATGATGTTGAAGCACGCATAACTTTGGCTTCCCTCCTCCTTGAAGAAGCGAAAGTAGATGAAGCTATTACCTTGCTGTCTCCTCCAATGGGTTCTGATTTTGAAGAAACACATTCAAATAAGTCAAAAGGATGGTGGGTTAATGAAAGGATAAAATTGAAGCTCTGTAACATATATCGAGATAGAGGGATGCTTGATGATTTTGTGGACACAATTTTCCCTTTGATACGTGAATCACTGTATGTTGCAACTCTCCGTCAAAAGGGTAATGCAAAAAAGCGCCTGTCCACAAGAGATCTAGTTGAACGGGTTAAAGGATTGGATAATGGAGAAAATGATAATGTATTTCAAGGATTTCGGCCCATTGGTCATCCATCTGATTTGTTGAAAGCTTCGAGAGCAAAAAAGTTGCTCCAGAAGAAGGAGAAAAGAAAAGCCGAGGCACTTGCAACTGGAACTGATTGGCTGAGTGATGATTCCAATGATGATCCTGTGAGAGTAAACAAAAAACCTCCTTTGTCTAATCTCATCAATGATGAAGAACATCATCAGCTAATCATTGATTTGTGCAAGGCATTGGCATACTTGAAAAGGTATTGGGAAGCACTGGAGATCATTAGTCTCACTCTGAGAGTGGCTCAAACTGCTTTGTCCAATGAGAAGAAAGAGGAAATTCAATCTCTTGGATCTCAAATGGCATACAACACCACAGATCCTAAGGAGGGATTTGACTGTGTAAAATGCCTTGTTCAGCAGCACCCTTACAGTATTTTCTCTTGGAATTGCTACTACAAGGTTATCTGTAGATTGAAAAATCGAGATACAAGACACTGCAAATTTGTACGAGATATGCAAGGAAAATTTGTGGATTGTGTGCCACCTATCCTCATTTCTGGACATCAGTTTACCATATTCAGCCATCATCAAGATGCTGCAAGGAAATACCTTGAAGCTTATAAACTTCTGCCAGAGAATCCCTTGGTTAATCTCTGTGTTGGAACTGCATTGATTAACTTAGCTTTGGGTTTCAGACTTAAAAACAAGCATAACTGTCTTGTACAAGGTTTAGCATTCTTGTACAACAATTTGAAAATCTGTGGGAACAGCCAGGAATCATTGTACAATATTGCTCGGGCATTCCATCATGTTGGTCTGGTAACTCTGGCGGCTTTGTATTATGAGAAAGTGCTTGCTTCCAGCGAGAGAGACTACCCGATTCCAAGACTTCCCAATGAGAATCCAGAGACAAGGGGAAATCATAAGCCTGGTTACTGCGACCTTCGCAGAGAGGCCGCCTACAATTTGCATCTAATCTACAAGAAGAGTGGGGCTCTAGATCTTGCTAGGCAACTTCTAAAGGATCATTGTGCTCTTTGA 3189 0.412 MVFARGAEARQKAKRERRERRETTLTNTHKRQTQLFPFDLLEVRKGLSSHSQQTRTTATRRSPNSVKEEHNTTLSLKPVHTTNRSTTSQSPLQSIISFIQLMVYEALKNFLLLREADIAGLVEAAGSRSTSLELVGQGSFGDVYKGLYLMAKEGSCTGDVETGSRSSFIEVAMDVEEREHEEEEKEDNSTEEEHVEDIEEADEEEKGEYAARFCSGLQCNQQFECLGYEALADKKRKAIAGCLREETSFKKAREDAIFGASIDEIMEVMNFDMRRRSRKPKKRGRRKGSKNKLNPQLTRMLGDATIHLVSGRYDQSIHVLHEVIRLAPNCPDAYHCLGRVYTELKDYKRAIDFYMIYAHMAPKDSMTWIWLFTQSIGIGQAIYCFSKAVAADPENRHLRHHLALLYVHLGNYQKAAATYEQLHQLCPEDFDALKEAAKFYRKCGRVEWSVHILEDYLKAQPDEVNASVVDLLAAILMETKAHDRALQHIEHAQVINSGKELPLNLKIKAGICHVHLGNLEMAQVLFNDLKPECASEHDGLVTEVADSLMNLGHYNSALNYYLMLDGNSGSENGLLHLKIARCYLSLKEKVQAILFFSKALETLPDDVEARITLASLLLEEAKVDEAITLLSPPMGSDFEETHSNKSKGWWVNERIKLKLCNIYRDRGMLDDFVDTIFPLIRESLYVATLRQKGNAKKRLSTRDLVERVKGLDNGENDNVFQGFRPIGHPSDLLKASRAKKLLQKKEKRKAEALATGTDWLSDDSNDDPVRVNKKPPLSNLINDEEHHQLIIDLCKALAYLKRYWEALEIISLTLRVAQTALSNEKKEEIQSLGSQMAYNTTDPKEGFDCVKCLVQQHPYSIFSWNCYYKVICRLKNRDTRHCKFVRDMQGKFVDCVPPILISGHQFTIFSHHQDAARKYLEAYKLLPENPLVNLCVGTALINLALGFRLKNKHNCLVQGLAFLYNNLKICGNSQESLYNIARAFHHVGLVTLAALYYEKVLASSERDYPIPRLPNENPETRGNHKPGYCDLRREAAYNLHLIYKKSGALDLARQLLKDHCAL* 1063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0998 1062 MobiDBLite consensus disorder prediction 275 292 - -
Dod04g0998 1062 ProSiteProfiles IQ motif profile. 1 22 IPR000048 GO:0005515
Dod04g0998 1062 MobiDBLite consensus disorder prediction 176 202 - -
Dod04g0998 1062 MobiDBLite consensus disorder prediction 273 294 - -
Dod04g0998 1062 Gene3D Tetratricopeptide repeat domain 728 1062 IPR011990 GO:0005515
Dod04g0998 1062 MobiDBLite consensus disorder prediction 8 27 - -
Dod04g0998 1062 ProSiteProfiles TPR repeat profile. 331 364 IPR019734 GO:0005515
Dod04g0998 1062 Gene3D Tetratricopeptide repeat domain 230 501 IPR011990 GO:0005515
Dod04g0998 1062 Gene3D Tetratricopeptide repeat domain 502 685 IPR011990 GO:0005515
Dod04g0998 1062 Pfam Tetratricopeptide repeat 304 364 - -
Dod04g0998 1062 SMART tpr_5 466 499 IPR019734 GO:0005515
Dod04g0998 1062 SMART tpr_5 573 606 IPR019734 GO:0005515
Dod04g0998 1062 SMART tpr_5 396 429 IPR019734 GO:0005515
Dod04g0998 1062 SMART tpr_5 974 1007 IPR019734 GO:0005515
Dod04g0998 1062 SMART tpr_5 331 364 IPR019734 GO:0005515
Dod04g0998 1062 SMART tpr_5 297 330 IPR019734 GO:0005515
Dod04g0998 1062 ProSiteProfiles TPR repeat profile. 396 429 IPR019734 GO:0005515
Dod04g0998 1062 SUPERFAMILY TPR-like 545 1007 IPR011990 GO:0005515
Dod04g0998 1062 PANTHER TRANSCRIPTION INITIATION FACTOR IIIC TFIIIC , POLYPEPTIDE 3-RELATED 176 1060 IPR039340 GO:0006383
Dod04g0998 1062 MobiDBLite consensus disorder prediction 47 88 - -
Dod04g0998 1062 Coils Coil 735 755 - -
Dod04g0998 1062 Coils Coil 173 201 - -
Dod04g0998 1062 Pfam Tetratricopeptide repeat 400 431 IPR019734 GO:0005515
Dod04g0998 1062 MobiDBLite consensus disorder prediction 47 61 - -
Dod04g0998 1062 ProSiteProfiles TPR repeat profile. 573 606 IPR019734 GO:0005515
Dod04g0998 1062 SUPERFAMILY TPR-like 305 629 IPR011990 GO:0005515
Dod04g0998 1062 MobiDBLite consensus disorder prediction 68 88 - -
Dod04g0998 1062 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0998 Dod-Chr4 28955235 29009152 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0998 117 147 MAP Kinase Kinase Kinase Kinase AT3G15220 64.516 5.83e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0998 K15201 - gmx:100804533 1228.77