Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0977 ATGGAACCCAGATTCGGGTTGCTCGATCTGCTCTTCCCGCTCCTCCTGTTGCTAGGCTCGGTTCCTTTCAGCGCAGAAGCCAAGTGCAGCCAGGGTTGTCCACTAGCTCTAGCCTCTTACTACATGTGGAGGGGTTCCAACCTCACATACGTCTCACAGATCATGCAATCCAGCGTTCTCAAAACCGCTGATGACATAGTCAGCTACAACAAAGACACCGTTCCAAACAAAGACAGTGTCCAAGCCGACATAAGGGTCAACGTCCCTTTCCCATGTGACTGCATCGGCGGCGAGTTTCTCGGCCACACGTTTCGGTACGATGTTCAGACAGGGGACACCTACACGACTGTTGCGGGGACCAACTACGCCAACTTGACCACCGCTGATTGGTTGAGGAGGTTCAATAGCTACCCGGACAACAACATTCCAGACACTGGAACGCTCAATGTTACCGTAAATTGCTCTTGTGGGAACACTGATGTGGGGAATTATGGGTTGTTCGTGACGTACCCTCTCAGGCCTGGGGAGACTCTGGGGACCGTGGCGAATAGCACAGGTCTTGACTCTGGCTTGCTGCAGAGGTACAATCCCTCTGTGAATTTCAACCAAGGGAGTGGCCTCGTTTTCATTCCTGGCAAAGATCAAAATGGCAGCTATGTGTTTTTGGGGTCCAGTTCAGGAGGTCTTGCTGCTGGGGCTATTGCCGGAATAGCTGTTGGAGTAATAGCTGGCCTTCTATTATTAGCAGTTGGTATATATTTTGGATATTTCAGGAAAAAGAACATACAGAAGGAGGAATTGCTACAACAAGACACCAAAGCACTCTTCCCTCAAGATGGGAAAGATGAAACTTCTCGTAGTGCTGCATATGAAACTGCTGGTCCTGGTGCTCCTGCTGCCATCACAGGCATAACAGTGGACAAATCGGTGGAGTTCTCATATGAAGAATTAGCAACTGCGACAAATAACTTTAGTTTGGCTAATAAAATTGGTCAAGGGGGTTTTGGCGCTGTCTACTATGCAGAGCTGAGGGGAGAGAAAGCTGCAATCAAGAAGATGGATATGCAAGCATCAAAAGAATTTCTTGCAGAATTGAAAGTCCTGACACGTGTTCACCACCTTAACTTGGTGCGGTTGATTGGATATAGTATCGAGGGTTCCCTTTTCCTTGTCTATGAATTCATTGAGAATGGAAACTTAGGCCAACATCTCCGCGGTTCTGGAAGAGACCCACTGCCATGGGCTACCCGGGTTCAGATTGCTTTGGATTCTGCCAGAGGTCTTGAATATATTCATGAGCATACAGTGCCTGTATATATTCATCGGGACATAAAATCAGCAAATATATTAATAGACAAAAACTTCCGTGGGAAGGTTGCTGATTTTGGGTTGACCAAACTGACAGAAGTTGGAAGCTCATCACTTCCCACCGGTCGACTTGTTGGAACATTTGGATACATGCCACCAGAGTATGCTCAATATGGAGATGTTTCACCCAAAGTAGATGTGTATGCATTTGGAGTTGTTCTTTATGAACTTATTTCAGCTAAGGAAGCTATAGTCAAGACAGGCGAATATGTTGCTGACTCAAAGGGCCTTGTAGCTTTGGTCAATCTCGATTTCTTACCTCACGAATTTTATCAGTATAGTCATTGTAAAATATGGTATTGA 1671 0.4632 MEPRFGLLDLLFPLLLLLGSVPFSAEAKCSQGCPLALASYYMWRGSNLTYVSQIMQSSVLKTADDIVSYNKDTVPNKDSVQADIRVNVPFPCDCIGGEFLGHTFRYDVQTGDTYTTVAGTNYANLTTADWLRRFNSYPDNNIPDTGTLNVTVNCSCGNTDVGNYGLFVTYPLRPGETLGTVANSTGLDSGLLQRYNPSVNFNQGSGLVFIPGKDQNGSYVFLGSSSGGLAAGAIAGIAVGVIAGLLLLAVGIYFGYFRKKNIQKEELLQQDTKALFPQDGKDETSRSAAYETAGPGAPAAITGITVDKSVEFSYEELATATNNFSLANKIGQGGFGAVYYAELRGEKAAIKKMDMQASKEFLAELKVLTRVHHLNLVRLIGYSIEGSLFLVYEFIENGNLGQHLRGSGRDPLPWATRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFRGKVADFGLTKLTEVGSSSLPTGRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKTGEYVADSKGLVALVNLDFLPHEFYQYSHCKIWY* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0977 556 SUPERFAMILY Protein kinase-like (PK-like) 306 523 IPR011009 -
Dod04g0977 556 SMART serkin_6 324 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g0977 556 ProSiteProfiles Protein kinase domain profile. 324 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g0977 556 ProSitePatterns Serine/Threonine protein kinases active-site signature. 439 451 IPR008271 GO:0004672|GO:0006468
Dod04g0977 556 Gene3D Phosphorylase Kinase; domain 1 309 394 - -
Dod04g0977 556 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-LIKE 10 538 - -
Dod04g0977 556 Gene3D Transferase(Phosphotransferase) domain 1 395 536 - -
Dod04g0977 556 ProSitePatterns Protein kinases ATP-binding region signature. 330 352 IPR017441 GO:0005524
Dod04g0977 556 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 10 538 IPR044812 GO:0019199|GO:0045087
Dod04g0977 556 Pfam Protein tyrosine and serine/threonine kinase 326 516 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0977 Dod-Chr4 28376235 28392593 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0977 8 541 Receptor kinase-like Gene Family AT3G21630 59.116 0.0 617
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Dod04g0977 PK_Tyr_Ser-Thr 1.3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0977 - K13429 gmx:100777781 813.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0977 04 28376235 28392593 Dod08g0553 08 6290615 6295811 PCT