Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0976 ATGATCCAGAAGAAAGAGAAGGAAATGATGAAAGCAGAGTTCAAGGGGGATGATTTATTGAGCATTCTATTGCAGTGCAAAGGACTGAGCAACAACACTCTGACAAGTGAGGATTTGATAGAAGAATGCAAGTTGTTCTTCTTTGCTGGCCAAGAGACCACAGCAAATCTTCTTACTTGGACTATGATTGTTTTATCCATACATCAAGATTGGCAAGAAAAGGCAAGAGCAGAGGTATTGCATACTTGTGGCAAGAAGGGACCTGACAGTGAAGCCATAAATCAGCTCAAGATCGTATCGATGGTACTACATGAAATCCTAAGGTTGTATCCTCCGGTGACAGCAACATATCGATACACCAAGTGTGCAACAAAGATAGGAAGCATATCCGTCCCAGCTGGGGTTGAGGTCTATTTACCACTGATGCTTCTACACCATGATGGTAACTATTGGGACAATCCAGAAGAATTCAATCCGGAGAGGTTTGCTGAGCAGGTTTCCAAAGCTTCAAAGGATCAAATTGCTTTCTACCCATTTGGATGGGGCCCAAGAATCTGCCTAGGCCAAAAGTTTGCCATGATAGAGGCAAAGATTGCTCTGGCTATGATTCTCCAACATTTCTCATTCCATCTCTCACCCTCTTACACCCATGCTCCTTACACTAGGATTACTCTTAAGCCACAACATGGTGCTCCTATAATTCTACGACGTATCAGTGAGTAG 723 0.4315 MIQKKEKEMMKAEFKGDDLLSILLQCKGLSNNTLTSEDLIEECKLFFFAGQETTANLLTWTMIVLSIHQDWQEKARAEVLHTCGKKGPDSEAINQLKIVSMVLHEILRLYPPVTATYRYTKCATKIGSISVPAGVEVYLPLMLLHHDGNYWDNPEEFNPERFAEQVSKASKDQIAFYPFGWGPRICLGQKFAMIEAKIALAMILQHFSFHLSPSYTHAPYTRITLKPQHGAPIILRRISE* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0976 240 SUPERFAMILY Cytochrome P450 5 236 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod04g0976 240 PRINTS P450 superfamily signature 186 197 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod04g0976 240 PRINTS P450 superfamily signature 101 112 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod04g0976 240 PRINTS P450 superfamily signature 49 66 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod04g0976 240 PRINTS P450 superfamily signature 177 186 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod04g0976 240 Gene3D Cytochrome P450 1 239 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod04g0976 240 PRINTS E-class P450 group I signature 140 164 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod04g0976 240 PRINTS E-class P450 group I signature 58 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod04g0976 240 PRINTS E-class P450 group I signature 100 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod04g0976 240 PRINTS E-class P450 group I signature 176 186 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod04g0976 240 PRINTS E-class P450 group I signature 186 209 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod04g0976 240 PRINTS E-class P450 group I signature 38 55 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod04g0976 240 PANTHER CYTOCHROME P450 72A15-LIKE 1 236 - -
Dod04g0976 240 Pfam Cytochrome P450 2 214 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod04g0976 240 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 179 188 IPR017972 GO:0005506|GO:0016705
Dod04g0976 240 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0976 Dod-Chr4 28341927 28342948 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0976 1 238 Cytochrome P450 AT3G14690 51.867 8.10e-92 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0976 - - lja:Lj0g3v0208029.1 342.813