Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0953 ATGGCAATGGTTAGCAAAGAGGACTTGAAGGATGAAAATGAGGAAACACAAGAGCTCACATACCCAAGAATTTCATATCAACAACTTATTGAAGCCAGTGGTGGCTTCAGTTCTTCTAGCCTAATCGGTTCAGTTAGAGTAGTGCATTGTGATCTTAAGTCAAGCAATATACTACTAGATGATGATTTCACAGCTTTGGTAACTAATTTTGGTATTGCAAGGCTTGTTAAAAGTGATGAGAGTAGGCCCACCAATGATTTGGAATCTTTTAGTTCAACACACGGCTTGTTATGCGGCTCTATTACCTACATAGCACCTGGAAATAGAGTATGGAATGGGAAAACAAGCGTCAACTCATGGTGA 363 0.3967 MAMVSKEDLKDENEETQELTYPRISYQQLIEASGGFSSSSLIGSVRVVHCDLKSSNILLDDDFTALVTNFGIARLVKSDESRPTNDLESFSSTHGLLCGSITYIAPGNRVWNGKTSVNSW* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0953 120 ProSitePatterns Serine/Threonine protein kinases active-site signature. 47 59 IPR008271 GO:0004672|GO:0006468
Dod04g0953 120 Pfam Protein kinase domain 44 106 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g0953 120 PANTHER LEUCINE-RICH RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN 8 44 - -
Dod04g0953 120 PANTHER OS04G0122200 PROTEIN 8 44 - -
Dod04g0953 120 PANTHER OS04G0122200 PROTEIN 45 106 - -
Dod04g0953 120 Gene3D Transferase(Phosphotransferase) domain 1 4 115 - -
Dod04g0953 120 ProSiteProfiles Protein kinase domain profile. 1 120 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g0953 120 SUPERFAMILY Protein kinase-like (PK-like) 44 106 IPR011009 -
Dod04g0953 120 PANTHER LEUCINE-RICH RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN 45 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0953 Dod-Chr4 27345404 27346433 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0953 47 118 Receptor kinase-like Gene Family AT3G47570 47.945 6.26e-11 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Dod04g0953 Pkinase 6.9e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0953 - - gmx:100793495 97.8265