LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod04g0947	ATGAGGCTACCAGGCACTACCATTTACTATTTCATCCCGTTCCTTCTTGTCTCTCTACTGCACAGACCCTGCTCTGCAGAGAAAAAGTCTTATGTTGTGTACATGGGAGCCCACTCACATGACCCAGAATTGTCTTCAATTGATTTCAATCAAGTGACAGAGTCCCACTACGAGTTTCTGGGATCCTTCTTGGGAAGTTCTAGTAGAGCCAAAGAGTCAATCTTTTACTCTTACACAAGGCACATAAATGGTTTTGCTGCAACTTTGGAGGAAGAAGTAGCAGCTGAGATTGCAAAGCATCCCAAAGTAGTGTCGGTGTTTGTGAATAGTGGGAGGAAATTACACACCACTCGGTCATGGGAATTCATGGGGCTAGAGCATAATGGAGAAATCCCATCCAGCTCAATCTGGAAGAAAGCCAGATATGGTGAAGGCGTGATTATAGGAAACCTGGATACAGGTGTTTGGCCTGAATCTAAGAGCTTTAGTGATGAAGGGTTGGGACCAATTCCACCAAAGTGGAGAGGAATATGTGATAGTGGATCAGATCCCAGTTTTCACTGCAACAGGTGCAAGCTTATAGGGGCAAGGTACTTCGACAAAGGCTACGGTTCCGTTGCTGGCCCAATCAACTCCTCGTCGATCTCACCTCGTGACAGTGAAGGCCATGGATCGCACACCCTATCAACAGCTGGTGGCAACATGGTACCTGGGGCCAGCGTCTTCGGCCAAGGCTACGGAACAGCAAAAGGTGGCTCGCCAAAGGCACGTGTGGCAGCCTACAAGGTTTGCTGGCCCCCTATTGCCGGTGAAGAGTGCTTCGATGCAGATATCATGGCAGCATTCGATGCGGCCATCCATGACGGTGTTGATGTGCTGTCTATTTCATTAGGTGGCTCTCCCTCTGCCTTTTTCAGTGACAGTGTTGCCATTGGGTCCTTTCATGCTGCCAGGCATGGGATTGTTGTTGTCTGCTCTGCTGGCAATGATGGCCCTGCAGATGCTACAGCAGTGAATCTTGCACCTTGGCATATCACGGTTGGGGCCAGCACAATGGATAGGGAATTCCCCAGTTATGTTGTCCTTGGCAACAAGATGAGCTTGAAGGGCCAGAGTTTATCAACTGCAAGATTGGCACACAACTTCTACCCAATTGTTAAAGCTACAGATGTTAAATTGGCTACTGCAACGGTTGATGATGCGGTGCTATGCCAGAATAGAACACTGGATCCCAATAAGGTGAAGGGAAAGATCGTTGTATGCCTCCGTGGGATAACTGCAAGAGTGGACAAGGGAGAGCAAGCTTTGCTAGCAGGAGCTGTGGGAATGGTTCTTGCCAATAATAAGACTAATGGGAATGAAATTTTGGCCGATCCTCATGTCCTTGCTGCCTCTCATGTTAACTTCACCGATGGTGCTGCTATATATGATTACATCAATTCAACCAAGTTCCCAGTGGCTTACATTACACATCCAAAGACCCAGTTGGGTACTAAGCCAGCCCCCGTCATGGCTGCATTTTCGTCAAAAGGACCAAACACTATTATACCAGGGATCCTAAAGCCTGATATAACTGCACCGGGAGTGTCGGTTATAGCAGCCTACACTGAAGCCGGAGGGCCAACAAATCAGGAGTTTGACAAGCGCCGGATTCCATTCAACTCGGTCTCAGGCACATCAATGTCATGCCCTCACGTTTCGGGCATTGTTGGATTGTTGAGAACGCTATATCCTTCATGGAGTCCCGCTGCTATTAAATCTGCAATCATGACCACCGCTACAACACTAGATAATGAGGTAGGGCCACTGCTGAATGCTACAAACGGCCAGGCAACACCATTTAGTTATGGAGCAGGACACGTTCAGCCAAACAGAGCAATGGATCCAGGCCTTGTTTATGACACAACAGTTGATGATTACCTGAACTTCTTATGTGCATTAGGCTACAACGAAACACAACTTTCGGTGTTTTCAGAAGGTCCTTATAAATGCCCCAAGGATTTCAATCTCCTCAACCTTAACTATCCTTCAATCACAGGTTCCAAATCTCTCCGGGTCAGTAACAGTCACAAGGACATTAAAAAATGTTGGTTCTCCAGCAACATATAA	2109	0.4732	MRLPGTTIYYFIPFLLVSLLHRPCSAEKKSYVVYMGAHSHDPELSSIDFNQVTESHYEFLGSFLGSSSRAKESIFYSYTRHINGFAATLEEEVAAEIAKHPKVVSVFVNSGRKLHTTRSWEFMGLEHNGEIPSSSIWKKARYGEGVIIGNLDTGVWPESKSFSDEGLGPIPPKWRGICDSGSDPSFHCNRCKLIGARYFDKGYGSVAGPINSSSISPRDSEGHGSHTLSTAGGNMVPGASVFGQGYGTAKGGSPKARVAAYKVCWPPIAGEECFDADIMAAFDAAIHDGVDVLSISLGGSPSAFFSDSVAIGSFHAARHGIVVVCSAGNDGPADATAVNLAPWHITVGASTMDREFPSYVVLGNKMSLKGQSLSTARLAHNFYPIVKATDVKLATATVDDAVLCQNRTLDPNKVKGKIVVCLRGITARVDKGEQALLAGAVGMVLANNKTNGNEILADPHVLAASHVNFTDGAAIYDYINSTKFPVAYITHPKTQLGTKPAPVMAAFSSKGPNTIIPGILKPDITAPGVSVIAAYTEAGGPTNQEFDKRRIPFNSVSGTSMSCPHVSGIVGLLRTLYPSWSPAAIKSAIMTTATTLDNEVGPLLNATNGQATPFSYGAGHVQPNRAMDPGLVYDTTVDDYLNFLCALGYNETQLSVFSEGPYKCPKDFNLLNLNYPSITGSKSLRVSNSHKDIKKCWFSSNI*	703

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod04g0947	702	PANTHER	SUBTILISIN-LIKE PROTEASE SBT5.4	16	679	-	-
	Dod04g0947	702	PANTHER	PEPTIDASE S8	16	679	-	-
	Dod04g0947	702	ProSiteProfiles	Serine proteases, subtilase domain profile.	119	627	-	-
	Dod04g0947	702	SUPERFAMILY	Subtilisin-like	114	631	IPR036852	GO:0004252\|GO:0006508
	Dod04g0947	702	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	19	115	IPR037045	-
	Dod04g0947	702	Pfam	PA domain	405	475	IPR003137	-
	Dod04g0947	702	CDD	PA_subtilisin_like	359	489	-	-
	Dod04g0947	702	Pfam	Subtilase family	143	618	IPR000209	GO:0006508\|GO:0008236
	Dod04g0947	702	MobiDBLite	consensus disorder prediction	211	230	-	-
	Dod04g0947	702	Pfam	Peptidase inhibitor I9	30	115	IPR010259	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod04g0947	Dod-Chr4	26985366	26999572	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dod04g0947	21	695	Subtilisin-like Serine Gene Family	AT2G04160	64.370	0.0	903

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod04g0947	-		-	gmx:100794807	1150.19

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