Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0937 ATGAATGCTTATCATTACCCAATTGCTCTCGGAATCGCCCCGGAGCGGACCAACGGCCTCGTCTTTCACATTCCTTGTCGGCACATGCTATCGGCCCAGCACCCTGAAAACAACATCCCATTTTGTTCTCTCCTCAGAGCAACACAAACTTTCTTCAGCTCCCATTCCCAAGTTCTTTCCAACAGAGCGAGTCTTCGGTTGTCACTTGCCATGGAAAATGAACTAGCAACACCAAGTGAAAGTGAAGGCCAATCTATAAGATGCAAAGCGGCGGTTGCTAGAAGACCAGGTGAGCCATTGGTTATTGAGGAAATCATTGTGGCGCCGCCAAGGCCTCGTGAAGTTCGCATTAGTGTTACATGTACCTCTCTCTGCGGCAGCGATGCCACTTTTTGGAAAATGCAGGACCCTCGTGGATATTTTCCGAGAATTCTGGGTCATGAGGCAGTTGGGGTTGTGGAAAGTGTAGGGAAGGAAGTAACTGAAGTTACAAAAGGAGATGTAGTCATTCCAATTTTCCTACCAGATTGTGGGGAGTGTATAGATTGCAAATCAACCAAGAGCAACCGTTGTACTAATTTTCCATTTGAGATATCCCCTTGGATGCCTCGAGATGGTACTTCAAGATTCACTGATCAAAATGGAGAGATCATACACCATTTCATGTTTGTTTCAAGTTTTAGTGAGTACACTGTGGTTGACATTGCCAATGTAACAAAGATTGATCCTGAAATTCCCCCTGATAGGGCATGCCTTCTTAGTTGTGGTGTATCAACAGGGGTTGGTGCTGCTTGGAGAACAGCAGGTGTGGAGCCAGGGTCTACAGTAGCTATTTTTGGGTTGGGATCTGTTGGACTTGCAGTTGCTGAGGGAGCTAGACTTTGTGGAGCAGCTAGGATTATAGGTGTGGATGTCAACCCAGAAAAATATGAAATTGGGAAAAGGTTTGGACTCACAGACTTTGTCCATCCGGGAGAATGTGGAAAGAAACCAGTGAGCCAGGTTATCATAGAGAATACTGGTGGGGGAGCGGATTATTGCTTTGAATGTGTTGGTATGGCATCAGTGGTGCATGAAGCTTTTGCTTCTTGTAGAAAGGGATGGGGAAAAACAATTGTTGTAGGAGTTGACAAGCCAGGAGCCATGTTGAGCCTCAGTTCTTATGAGGTCCTTCATGATGGCAAAACCCTCATGGGATCCTTATTTGGAGGACTGAAACCCAAATCTCATGTGCCCATTCTCCTTGAACGATACATGGGCAAGGAACTGCAATTGGATGAGTTCGTCACTCATGAGGTGGAGTTTAAGGACATCAATAAAGCTTTTGATTTATTGAACAAAGGACATAGTCTTCGATGTGTCATTTGGATGGACAAATGA 1380 0.4529 MNAYHYPIALGIAPERTNGLVFHIPCRHMLSAQHPENNIPFCSLLRATQTFFSSHSQVLSNRASLRLSLAMENELATPSESEGQSIRCKAAVARRPGEPLVIEEIIVAPPRPREVRISVTCTSLCGSDATFWKMQDPRGYFPRILGHEAVGVVESVGKEVTEVTKGDVVIPIFLPDCGECIDCKSTKSNRCTNFPFEISPWMPRDGTSRFTDQNGEIIHHFMFVSSFSEYTVVDIANVTKIDPEIPPDRACLLSCGVSTGVGAAWRTAGVEPGSTVAIFGLGSVGLAVAEGARLCGAARIIGVDVNPEKYEIGKRFGLTDFVHPGECGKKPVSQVIIENTGGGADYCFECVGMASVVHEAFASCRKGWGKTIVVGVDKPGAMLSLSSYEVLHDGKTLMGSLFGGLKPKSHVPILLERYMGKELQLDEFVTHEVEFKDINKAFDLLNKGHSLRCVIWMDK* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0937 459 Pfam Zinc-binding dehydrogenase 284 404 IPR013149 -
Dod04g0937 459 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 245 419 IPR036291 -
Dod04g0937 459 PANTHER ALCOHOL DEHYDROGENASE 81 456 - -
Dod04g0937 459 PANTHER ALCOHOL DEHYDROGENASE-LIKE 7 81 456 - -
Dod04g0937 459 Gene3D - 260 400 - -
Dod04g0937 459 Gene3D - 91 452 - -
Dod04g0937 459 SUPERFAMILY GroES-like 81 266 IPR011032 -
Dod04g0937 459 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 146 160 IPR002328 GO:0008270|GO:0016491
Dod04g0937 459 SUPERFAMILY GroES-like 408 456 IPR011032 -
Dod04g0937 459 Pfam Alcohol dehydrogenase GroES-like domain 113 240 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0937 Dod-Chr4 25406161 25417602 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0937 114 447 Monolignol Biosynthesis Gene Families AT2G21730 26.409 1.83e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0937 K00121 - gmx:100817521 675.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0937 04 25406161 25417602 Dod08g0518 08 5814452 5822960 PCT