Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0906 ATGTGGGCAGAAATTGACATATGGTGTGTTGGTATCATGCTATACATTCTTCTATCTGGTGTTCCTCCATTTTGGGCAGAATCCGAACATGGTATATTCAATGCCATCCTGAGAGGTCACATTGACTTTTCAAGTGATCCGTGGCCTTCAATTTCACCTGCAGCAAAAGATCTCGTACGGAAAATGTTGAATTCAGATCCCAAACAAAGACTTACAGCTCATGAAGTTCTGAATTATCCTTGGATTCAGGAAGACGGAGAAGCACCAGATAAGCTTCTTGACAACGCCGTGTTGAATAGGCTCAAGCAGTTCAAAGCAATGAACGAATTCAAGAAAGTTGCTCTAAGGGTTATTGCTGGATGTCTATCAGAAGAAGAAATCGTGGGGTTGAAGGAAATGTTCAAGGGGATGGACACCGATAGTAGTGGAACTATTACAATTGAAGAGTTCAAGCAAGGGCTTGCAACACGAGGGACAAAACTGTCAGAACAAGAAGTTCGGCAATTAATGGAAACTGCTGATGCTGATGGAAATGGTACCATAGATTACGAAAATGAACAGAGAAGAACATCTTTATACTGCCTTCCAGTACTTTGA 597 0.4154 MWAEIDIWCVGIMLYILLSGVPPFWAESEHGIFNAILRGHIDFSSDPWPSISPAAKDLVRKMLNSDPKQRLTAHEVLNYPWIQEDGEAPDKLLDNAVLNRLKQFKAMNEFKKVALRVIAGCLSEEEIVGLKEMFKGMDTDSSGTITIEEFKQGLATRGTKLSEQEVRQLMETADADGNGTIDYENEQRRTSLYCLPVL* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0906 198 ProSitePatterns EF-hand calcium-binding domain. 138 150 IPR018247 -
Dod04g0906 198 ProSiteProfiles Protein kinase domain profile. 1 82 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g0906 198 CDD EFh 130 184 IPR002048 GO:0005509
Dod04g0906 198 Pfam Protein kinase domain 4 82 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g0906 198 Gene3D - 90 187 - -
Dod04g0906 198 SMART efh_1 165 193 IPR002048 GO:0005509
Dod04g0906 198 SMART efh_1 129 157 IPR002048 GO:0005509
Dod04g0906 198 PANTHER SERINE/THREONINE-PROTEIN KINASE 3 185 - -
Dod04g0906 198 PANTHER CALMODULIN-DOMAIN KINASE CDPK PROTEIN 3 185 - -
Dod04g0906 198 SUPERFAMILY EF-hand 108 184 IPR011992 -
Dod04g0906 198 Pfam EF-hand domain pair 130 184 IPR002048 GO:0005509
Dod04g0906 198 SUPERFAMILY Protein kinase-like (PK-like) 4 105 IPR011009 -
Dod04g0906 198 Gene3D Transferase(Phosphotransferase) domain 1 4 83 - -
Dod04g0906 198 ProSiteProfiles EF-hand calcium-binding domain profile. 125 160 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0906 Dod-Chr4 23210759 23211932 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0906 4 183 EF-hand Containing Proteins AT5G12180 84.444 1.18e-110 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Dod04g0906 Pkinase 1.4e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0906 K13412 - gmx:100781355 327.791