Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0891 ATGGCCGAGCATGGCATCTCAATGTCCCTCTCCCACACCTCCGACGACTCCTCCTCGGAACAGCCAACTGCCACCACTCATGGCGGTGGAGGCTTCGTCGGCTCCTCCTCCCACCGGAGGCTGCCACCCTCCCCCGCAGCGTTCCAGGCGCTGGCCCTGCCGCCGCAGAAGAAGCCACGTGGCAGGCCCCCGGGCTCCAAGAACAAGCCGAAGCCTCCGGTGGTGATCACCCAGGATAGCGAGCAGGTGCTGAAGCCGGTGGTCATCGAGGTGGCCGCCGGCGCTGACGTGGTGGAGGCGGTGGTGAGCTTCGCCCACCGCCGCAACGTCGGCATCTCCGTCCTCAGCGGGTCAGGCACCATTGCTAATGTCACCCTTCGCCACCCTTACTCCCATGCTCCTGCTTTGACCCTCCATGGACCTTTCACCATGCTGTCCTTCACTGGCAGCTACATCCCTTTATCTCTTTCGTCTTCTTCTGCTGCTGCTCTTCCTCCTCCTCCTACTCCTCCTCCTTCTCGTCCTCCTCTCGCTGCTGCTGCTTCTTCTCCTTCTTCAGCCAATGCTAACAACCCAGTTTGCTCCTCCTTTGCGATCTCCTTCTCGGGGTCCCAGGGGCAGATATTTGGTGGGGTTATTGCTGGGAGCCTGGTGGCGGCCACTACGGTGGTGGTGGTTGCCTCCGTTTTCAAGAAGCCTGAGATTCACAGGGTTGGCGGTGAAGGTGGTGGTGGTGATGATAACGGTGGTGATGATCGGGATAACACGAGTGGAGGCGGTGGTGATCAGGGTGGTGGCAGTGACAACGCCATGTCAGCTGGCTTCAGTGTCGCCACCCCAAGCACCATCAATTGTCACCTTGGTGATGTGAACGTGATGCAATGGGGCCACACTCACTCCTCCTCTCGCACTGCAAATTACTGA 924 0.6017 MAEHGISMSLSHTSDDSSSEQPTATTHGGGGFVGSSSHRRLPPSPAAFQALALPPQKKPRGRPPGSKNKPKPPVVITQDSEQVLKPVVIEVAAGADVVEAVVSFAHRRNVGISVLSGSGTIANVTLRHPYSHAPALTLHGPFTMLSFTGSYIPLSLSSSSAAALPPPPTPPPSRPPLAAAASSPSSANANNPVCSSFAISFSGSQGQIFGGVIAGSLVAATTVVVVASVFKKPEIHRVGGEGGGGDDNGGDDRDNTSGGGGDQGGGSDNAMSAGFSVATPSTINCHLGDVNVMQWGHTHSSSRTANY* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0891 307 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 8 298 IPR014476 GO:0003680
Dod04g0891 307 MobiDBLite consensus disorder prediction 7 32 - -
Dod04g0891 307 MobiDBLite consensus disorder prediction 236 273 - -
Dod04g0891 307 ProSiteProfiles PPC domain profile profile. 81 257 IPR005175 -
Dod04g0891 307 MobiDBLite consensus disorder prediction 236 253 - -
Dod04g0891 307 MobiDBLite consensus disorder prediction 159 185 - -
Dod04g0891 307 Pfam Plants and Prokaryotes Conserved (PCC) domain 85 231 IPR005175 -
Dod04g0891 307 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 8 298 - -
Dod04g0891 307 SUPERFAMILY AF0104/ALDC/Ptd012-like 84 238 - -
Dod04g0891 307 CDD DUF296 85 217 IPR005175 -
Dod04g0891 307 MobiDBLite consensus disorder prediction 1 76 - -
Dod04g0891 307 Gene3D - 84 245 - -
Dod04g0891 307 MobiDBLite consensus disorder prediction 163 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0891 Dod-Chr4 21595183 21596106 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0891 57 298 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 39.271 4.95e-48 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0891 - - ahf:112712816 232.646