Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0857 ATGGTAACTATTACAGCATCTTATATTGTCACTCCAAATCAGGAAACTCCCGAAGGTAGTTTATGGTTAGCAGAGAGTGACCAAGTTGTGCGGAATAGCCATACACCCACAATCTACATTTACAAGGGAGAACACAACTATGATGTCATCGAGAGGATGAGAGACTCCCTTAGCAAGGTTTTAGTGCACTACTATCCATTAGCTGGTCGGTTGAGTTGGACAGAGGGTGGCAGATTGAAGCTGGACTGTAATTCAAAGGGAGTGATATTACTTGAAGCTAAATCCGCCAAAACATTAGCCGAATATGGTGATTTTTCACCAACTGAGCCCATCAAAGAACTTCTTCCTGCGGTTGATAACTCTCAACCCATCGAGGAAGTTCCCCCGTTTTTGGTGCAACTAACAAGATTTCGTGATGATGAAGGCATTGCCATTGGAGTTGCTTTTTTGCATCCGTTGAGTGATGGGTCAGGTGCTATCCGCTTCATCAACACATGGGCCAAGGTAGCCCGAGGTGATGCCTTAGGCCCGGATGAAATGCCATTTCTTGATCGAACAATACTCAAATCCTCCGACCCACCATTAGCACCACGCTTTGATCACCAAGAGTTTAAGCCGCTACCACTGAAAATAGGAAGCTCTGACGACACAACAGAGCGAACGAGGAAGATGACTTTCATACAATTGAAACTCATACCAAAGCAGGTGGAGAAATTGAGAATGAATGCCAATAGTGGTCACTCTCAAAAACAAGGGTCAAGACCTTATAGTAGATTTGAAGCTATTGGTGCGCATATATGGAGATGCGCTTCTAAGGCTCGTGATCTTGATGAAAACCAACCATCTGTGGTTAGGTTCACTACTGATTTTCGGAGCAGGCTAAATCCGCCTCTGCCCCAAAACTATTTTGGAAATGCTTTGGCTCCCGTGGTGACACCAACATGTTGCGTTGGTGAAATCATATCAAAGCCACCCAGTTATGCTGCCCAAAAGATAAGGGAAGCAGTGGACATGCTTACGGATAAGTACATAAGATCACAACTCGATTTCATTGCGCAACAGAAGCAAATGGATTTCCTAAGGCCTTCCTTCTCACAACCAGAGTGTAGAAATGTTCCGTTCTATGGGAATCCTAATATTACCCTCACAAGCTGGACAAGTATGCCGGTGTATGAAGCAGACTTTGGCTGGGGAAAGCCTGTTCATTTTGGTCATGCTGCTATTTCTCCATATGATAGGGCAACTATTGTTCAAAGCCCAGATGGGGACGGCTCTGTTGTTGTACTCATGAATTTCCAGGTTGCGCATATAGAAAAATTCATCAAGTTCTTTTGGGAAGATATCCATGAAGGTGGAGAACATTCTTTTAAGGAGGAGGCTTAG 1383 0.4425 MVTITASYIVTPNQETPEGSLWLAESDQVVRNSHTPTIYIYKGEHNYDVIERMRDSLSKVLVHYYPLAGRLSWTEGGRLKLDCNSKGVILLEAKSAKTLAEYGDFSPTEPIKELLPAVDNSQPIEEVPPFLVQLTRFRDDEGIAIGVAFLHPLSDGSGAIRFINTWAKVARGDALGPDEMPFLDRTILKSSDPPLAPRFDHQEFKPLPLKIGSSDDTTERTRKMTFIQLKLIPKQVEKLRMNANSGHSQKQGSRPYSRFEAIGAHIWRCASKARDLDENQPSVVRFTTDFRSRLNPPLPQNYFGNALAPVVTPTCCVGEIISKPPSYAAQKIREAVDMLTDKYIRSQLDFIAQQKQMDFLRPSFSQPECRNVPFYGNPNITLTSWTSMPVYEADFGWGKPVHFGHAAISPYDRATIVQSPDGDGSVVVLMNFQVAHIEKFIKFFWEDIHEGGEHSFKEEA* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0857 460 Gene3D - 211 445 IPR023213 -
Dod04g0857 460 Gene3D - 1 206 IPR023213 -
Dod04g0857 460 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 448 - -
Dod04g0857 460 Pfam Transferase family 1 441 - -
Dod04g0857 460 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 4 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0857 Dod-Chr4 19004612 19006264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0857 2 446 Monolignol Biosynthesis Gene Families AT5G48930 36.748 5.04e-96 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0857 K13065 - gmx:100779814 570.466