Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0852 ATGGGTTATTACAAAACAGAGAGCAAAGAGCCTGTCCTACATAGGGTAGGAGGAGGAAGGAATACTTGGACACTTGAAGTTAACTTCACAGAGTGGGCAAGTCACGAGCACTTCTACAAGGGCGATTGGTTATATTTTGGTTTTGACAAACACATCTACAATGTTCTGGAGGTGAACAAAACTAGTTTTGAAAACTGCATTGACACAGGTTTCATAAACAACATCACGAGAGGAGGGAGAGATGTCTTCCAGCTCACAGAAGAGAGGCCATACTATTTCCTTAGTGGAAAAGGATTCTGCTTTAGGGGTATGAAGGTTGCAATTGATGTTGAAAAGCCCAAATTAGCACCACCACTAATGGCCAACAGGGCTTTTACAACTTGTAGAATGATTCATACTAACATGCTTGTGCTTCTAGCAATAAATCTGGCTTGGACCTCCATAAAGTAA 450 0.4133 MGYYKTESKEPVLHRVGGGRNTWTLEVNFTEWASHEHFYKGDWLYFGFDKHIYNVLEVNKTSFENCIDTGFINNITRGGRDVFQLTEERPYYFLSGKGFCFRGMKVAIDVEKPKLAPPLMANRAFTTCRMIHTNMLVLLAINLAWTSIK* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0852 149 ProSiteProfiles Phytocyanin domain profile. 12 112 IPR003245 GO:0009055
Dod04g0852 149 Gene3D - 12 112 IPR008972 -
Dod04g0852 149 SUPERFAMILY Cupredoxins 13 110 IPR008972 -
Dod04g0852 149 PANTHER BLUE COPPER PROTEIN 1 138 IPR039391 GO:0009055
Dod04g0852 149 Pfam Plastocyanin-like domain 23 104 IPR003245 GO:0009055
Dod04g0852 149 PANTHER EARLY NODULIN-LIKE PROTEIN 1 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0852 Dod-Chr4 18646796 18648207 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0852 10 148 Phytocyanin Superfamily AT2G27035 51.079 1.14e-50 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0852 - - ccaj:109799995 223.787