LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod04g0850	ATGGCCCAGCTCAGCATTACGGGCTTCGGTGTGTCTATCATTCTAGCATTCACACTTTTCTTCCTGTGTGATGCTAATCACGATGACGATAATCCAAAACTCTACATTGTGTACATGGGGTCATTGCCTGAAAGAGCATACAATCCAACATCTCACCATCTTAACATGTTGCAACAAGTTGCTGATGGAAATAATGCAACAAGCTCCTCATTAGTTCGTAGCTTCCAGAGGAGTTTTAATGGTGCAAAATCTATCTCAAATGGAAGGTGTGGTCTCAATTTTCCCAAGCAAAACTCTTCAAACCCATACAACAAGATCTTGGGATTTCCCGACTTTGTGAAACGTCGCCAAACTTTTGGGAGTGAATTAGTCGTTGGGGTTATTGACTCTGGCATCTGGCCAGAATCAGATAGCTTCAATGATCAAGGTTTTGGCGTTGTTCCAAAAAAATGGAAGGGTACTTGTGCAGGTGGCCGAAACTTTACTTGCAACAAGAAGATCATCGGAGCAAGATTTTACGTAGAGGAGTCAGCAAGAGACAATGAAGGCCATGGAAGCCACACAGCATCCATTGCAGCTGGAAACAGCGTTAACAATGCGGGCTTTTATGGACTTGCGCAAGGTACTGCAAGAGGAGCTGTTCCATCGGCAAGAGTTGCAGTATACAAAGTTTGCACTGCACAAGGATGCGATGAGCAAAGTATCTTGGCTGGTTTTGATGATGCGATTGCCGATGGAGTTGACGTTATTTCAATATCGTTGGGGGGATCATTTCCATTACCCTTTGATGAAGATGTTCTTGCAATTGGTTCATTTCATGCTATGGCAAAAGGGATACTAACAGTGAGCTCTGCAGGAAATGATGGCCCTTCACCAAGCTCAGTATCAACTGTAGCACCATGGATACTAACTGTGGCTGCAAACACCATAGATCGTCAAATCATTGGCAAGGTGGTTCTTGGGAATGGAGTAACCTTGACTGGAAATTCAATAAATTCTTTCATGTCCAGTGGAACAAAATTCCCCATAGCTTTGCACCATGGTGATTCAAAAGATTGTCCCAAAGTTCAAGCCGAAGAGTGTGAATGCTTAGATAATGATCTGGTTAAAGGAAAGATAGTTGTGTGTCCAGACCCTTCTGGGGAAGATACAGCAAAAACTGCTGGGGCACTCGGTGCAATTGTAAAAGTAGTCGACGATTCTGAAGGCAATGTATCCTATGTTACTTCATTACCTTCCTTGTCTTTGTATTCCAAAGACTATGCTCTTGTTAAATCCTACAAAAATTCAGCAAAAGATCCACAAGCTGAAATACTGAAGAGTGAGGCTATTCAAGATCATACTGCTCCTAGAGTTGCTACGTTTTCTTCTCGTGGACCAAATAACATAGTCTCAGAAATTTTGAAACCCGATATAAGTGCCCCAGGTGTAGATATATTGGCAGCATATTCACCAATTGCTTCGCCCTCGAATGATCCTGAAGACAAGAGATCTGTCAAATACAGCATATTGAGTGGAACTTCAATGTCTTGTCCCCATGTTTCTGGAATTGCTACATATTTGAAAGCTTTTCACAGGAATTGGTCACCAGCAGCCATTAAATCTGCTATTATGACCTCGGCTCAACCCATGAATAGTTCTAACCATGAAGTTGGAGAATATGCTTATGGATCTGGGCAAGTCAATCCAGATCAAGCTGTAAGTCCTGGACTAGTTTATGACATTAACAAGGAAGACTACATACAAATGTTTTGCAACTTGGGTTATGATGCCCATAAGATTAGGCTGATATCTGGAGAAAACAAGCCTTGCTTAGGAGTTGCAGATAGAACTTTAGTGAGGAATCTGAATTATCCAGCCCTTGCAATTCAGGTTGAGCCCATGGTGCCTTTCAATGTCATGTTTAACAGGACAGTCACAAACGTTGGTGCAGCCAGCTCAAATTATAGAGCAACGATCACACTAAATCCAAAATTAAATATTACAGTGACACCAAGGGTTCTATCCTTCAGATTTTTGAATGAAAAGTTGTCTTTTGTAGTCACCATTGTTGGTAAAATCAAAAGTCAAGTTGTGCTTACCTCTTCAATAGTGTGGTCGGATGGGACCTATAATGTAAGGAGCCCAATTGTTGTAAATGTGTCCCTTTAG	2151	0.4175	MAQLSITGFGVSIILAFTLFFLCDANHDDDNPKLYIVYMGSLPERAYNPTSHHLNMLQQVADGNNATSSSLVRSFQRSFNGAKSISNGRCGLNFPKQNSSNPYNKILGFPDFVKRRQTFGSELVVGVIDSGIWPESDSFNDQGFGVVPKKWKGTCAGGRNFTCNKKIIGARFYVEESARDNEGHGSHTASIAAGNSVNNAGFYGLAQGTARGAVPSARVAVYKVCTAQGCDEQSILAGFDDAIADGVDVISISLGGSFPLPFDEDVLAIGSFHAMAKGILTVSSAGNDGPSPSSVSTVAPWILTVAANTIDRQIIGKVVLGNGVTLTGNSINSFMSSGTKFPIALHHGDSKDCPKVQAEECECLDNDLVKGKIVVCPDPSGEDTAKTAGALGAIVKVVDDSEGNVSYVTSLPSLSLYSKDYALVKSYKNSAKDPQAEILKSEAIQDHTAPRVATFSSRGPNNIVSEILKPDISAPGVDILAAYSPIASPSNDPEDKRSVKYSILSGTSMSCPHVSGIATYLKAFHRNWSPAAIKSAIMTSAQPMNSSNHEVGEYAYGSGQVNPDQAVSPGLVYDINKEDYIQMFCNLGYDAHKIRLISGENKPCLGVADRTLVRNLNYPALAIQVEPMVPFNVMFNRTVTNVGAASSNYRATITLNPKLNITVTPRVLSFRFLNEKLSFVVTIVGKIKSQVVLTSSIVWSDGTYNVRSPIVVNVSL*	717

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod04g0850	716	CDD	Peptidases_S8_3	118	541	IPR034197	-
	Dod04g0850	716	ProSiteProfiles	Serine proteases, subtilase domain profile.	100	567	-	-
	Dod04g0850	716	Gene3D	-	311	445	-	-
	Dod04g0850	716	PANTHER	SUBTILISIN-LIKE PROTEASE SBT4.3	34	714	-	-
	Dod04g0850	716	SUPERFAMILY	Subtilisin-like	105	571	IPR036852	GO:0004252\|GO:0006508
	Dod04g0850	716	Pfam	Fibronectin type-III domain	615	712	IPR041469	-
	Dod04g0850	716	CDD	PA_subtilisin_like	318	438	-	-
	Dod04g0850	716	Gene3D	-	584	715	-	-
	Dod04g0850	716	Gene3D	Peptidase S8/S53 domain	123	580	IPR036852	GO:0004252\|GO:0006508
	Dod04g0850	716	ProSitePatterns	Serine proteases, subtilase family, serine active site.	506	516	IPR023828	-
	Dod04g0850	716	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	22	82	IPR037045	-
	Dod04g0850	716	PRINTS	Subtilisin serine protease family (S8) signature	505	521	IPR015500	-
	Dod04g0850	716	PRINTS	Subtilisin serine protease family (S8) signature	120	139	IPR015500	-
	Dod04g0850	716	PRINTS	Subtilisin serine protease family (S8) signature	180	193	IPR015500	-
	Dod04g0850	716	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	34	714	IPR045051	-
	Dod04g0850	716	Pfam	Subtilase family	120	552	IPR000209	GO:0006508\|GO:0008236

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod04g0850	Dod-Chr4	18209936	18212115	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dod04g0850	25	712	Subtilisin-like Serine Gene Family	AT5G59100	50.902	0.0	694

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod04g0850	-		-	pop:7468606	753.821