Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0849 ATGGAGGGATCCTTAGGTGTAAGAAAAGGCGCATGGAGTAAAGAGGAAGACGACCTTCTAAGGGCATGTGTGGAACGATATGGGGAACAAACGTGGCACCTAGTGCCTATGAGAGCAGGCTTCAACAGATGCCGCAAAAGTTGTAGACTGCGGTGGTTGAATTATCTAAAACCAGATATCAAGCTGGGAAAGTTCACTGAGGATGAAGTTGATCTCACGATTAGAATGCATAGACTTTTGGGAAACAGGTTGGAGTTTGACATGTTGTCATATTAA 276 0.442 MEGSLGVRKGAWSKEEDDLLRACVERYGEQTWHLVPMRAGFNRCRKSCRLRWLNYLKPDIKLGKFTEDEVDLTIRMHRLLGNRLEFDMLSY* 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0849 91 Pfam Myb-like DNA-binding domain 9 56 IPR001005 -
Dod04g0849 91 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 6 84 - -
Dod04g0849 91 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 7 60 IPR017930 -
Dod04g0849 91 Gene3D - 9 61 - -
Dod04g0849 91 ProSiteProfiles Myb-like domain profile. 4 56 IPR001005 -
Dod04g0849 91 PANTHER TRANSCRIPTION FACTOR MYB113-RELATED 6 84 - -
Dod04g0849 91 SUPERFAMILY Homeodomain-like 10 83 IPR009057 -
Dod04g0849 91 SMART sant 8 58 IPR001005 -
Dod04g0849 91 CDD SANT 11 56 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0849 Dod-Chr4 18182989 18183541 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0849 2 83 MYB Transcription Factor Family AT1G66370 67.073 2.14e-37 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dod04g0849 Myb_DNA-binding 1.6e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0849 - K09422 adu:107471154 152.525