Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0842 ATGGCCATCGAAGGACAGAGTGTGGTTGTGATCCAGGATGCGTCTAAAGAACTTCATTTGAGAGTGTTCTTTTGGGCTCTAAATAACGGCTTATCGCTGAAGCCAGCAGATAAGCTCACTCTAGTTTCTGTCCTGCATCAGGTTTACACTCCTATGGGGTACAATTGCCCTGTGAACGGTGGCAACATGATCGAAGCGAATAAGAGGATCATTGAAAAAGTGGCTGCAAGGAAGATAGAAGAGTATCTTCACAACGAGGAGCTTGCAGAGATTGCTAAACTCTATGAATCAAATGAGGTTGAATTTAAGATACGGTTGGTTATAGGATCTTCACTGAAGGAGGTTGCTTTAACAGCAGCCATAAACCTAAAGGCAACTTGGTTGATACTTGACAGGCAAATGAAGAAAGATGAAGAATTTGTCCAGCAGAGGCTTGCTTGCGGTATATCAAGATTGAAACGAAACAATCGTATCGTATGCGTACGAGGACCTCTTGGTCCCTCCACAGAAATACAATGCAACAGCCATGAAACATTTGATGGGAGTTTACCGGAACACACACATGAAGATCTCTTCAGCATTGATGTTTATCCTAATAAGAAAATAAGAGTTGATGAGCTGAGCCAAAGACAAAGCAGACACCATGAGGAGGACGTGAACACAACACTTGTGATTAATAGTGAAGACATAAAAGGTAATCAAATGATAGGAGAAACAAAAGGAGATAAGCAAAGCCAAGATGAAGAAGAGACAGAAAGCACGCCTCATGAGGAGGAGTGGGGCACGACACTTGTGATTAACAATGATCAAACGACAGCCCACAAAGAAAAGAAGAGCACCACGGAAAATTCAGTATGCTCTATCTGCAAAACTAGACGGCCTAATACTGAATGGAAAAGGGAATTCACGTATGATGAACTCCAAGATGCAACTGATGTATTTTCATTGAAGAACTGTCTCTCTAAAAGTGGACATCTGTCTACTTTCAAAGGCAAGCTGGAGGGCCAGTTGAATATAGTAGTTAAGCAGCATGAGATCAAAAGTTCTCAAGCAGGGGAGAAAATCAAATCAGAAGTCCAATCCATCCTCAAGGCTAGGCATAAGAATGTTGTCATGCTGTTGGGTTCAACAACACAAGAAAATTTCCTGTTGACAGTATATGAGTATGGATGCAATGGTTCACTCGACAAGTATCTATCAACACCAGAGTGCCAAGAGAAGGGAAAACTATCAACTAAAGCAGATGTGTACTCATTTGGTGTGGTTCTGCTAGAGTTGATCACTGGGCGGAGGGTTACAGATTTTTCAGGGGAGAAAAGCCTAGTCGGATGGGCCAAGCCTCTTCTTGGAGGAAAGAAGTACCCACTGTTGGTAGATCCTATAATCAGCAAGTCATACGAAGAAGATAAACTTCATTGGCTGGTCCAAGTAATAGAACAATGTCTCAAAAAGAATCCTAAGGAAAGATTATCCATGAATATGGTTGTTTCTGCATTACAAGGCATAGAAGATAGCGAACAGGAATACATGACAGGTCCAGCAGAAACTGATCAGCCAAGCCAGGAACAGGAACAGGAACAGTCAGAGAGTGTTTCCTATGGGAAGGAAACGATGTTAAGACTAAGAGTTGAAAATAATCACTTCTACACATCAGGCCAGGGAAACTCTGATCAACTGAGCCAGTCTGAAGAACAGATGCAGAGCAGGCACCTAGGGGAGGAAAGGAGGTCGGGAAAGATGATAAACAATGACCACAGGATTGGACAGAAAGTAGTTGATCAGCTGAGTGGGCTTGAAGAACAGGTGAAGAGCAACCTCTATGAGGATGGCAACTCAACACAGAAAATCAGCAGTAACTACATCATACGTCAGACCACAGTTGACCAGCCAAGTCATGATAAAGAACAGAACAGTTGTTTTGGTGAAATGCAGAAAGGGTCAAGATCGACACCTACTGGTGAAATGATAAATCAAACAAAAGCATATAAGCTGATCCAAGATAAAGCACAGTGGCAGAGAAGCTCCCATGAGAATTTACTGGCTGCACATCAAGGTGAAATCATTTTGAAGAATTCAAAATCCTCTGCATGCTCTATATGCAAAAGTAAGCGGCCAAATATAGCATGGCAAAAAGACTTTACTTATGATGAACTACTAGAAGCTACAGAAGAATTTTCAATCAAGAATTCTCTATCTGAAAGTAAAGATGGACCTACTTTCAAAGGACTGCTAGAGAGTAAGCTGAAGATAGTAGTTAAGAAATATCAGATCACCAAGTTCCAGGAAGAGAAGATTTTCAAGTCAGAAGCCCAGTTGCTCTCCAAGGCTAGACATAAAAATGTGGTCATGCCATTGGGCTTATGTACAGATAAAAGCCAATTGATGATTGTGTATGAGCAAGTATGCAATGGTTCACTTGACCAGTTCCTATCAAGAGGAAGCTTCCAGTCATTGACTTGGAAAGACAGGATGAAAGTAGCAACAGGTACCGCTAGAGGCTTAAAGTATCTACATGCGAATGACATAATACATGGAAGTATAAAATCAAGTAACATTCTTCTGACACACGACTTTGAACCACTGATTGGAGATTTTGGCTTTGCAAAAGTGAAACTTGAAATGAAGAAATTAGACAAAAATAAGGAAGCAAGTAATTTTGGATATATAGCACCCGAGTACCTTGAGAGTGGGAAACCATCAAGTAAGGCAGATGTATACTCATTTGGAGTGGTTCTTTTAGAGCTGATCACTGGTCGTAGGGCTACAGACAAATTATCAGGAGGCAAAAACCTTGTTGGATGGGCAAGGGCCATGCTGGGAGGAAAGAAGTACCCGCAGTTGGTGGATCCAAAAATCAACAACTCCTATGAAGAAGAACAACTAAAATGGTTGGTCCAAGTAACCGAACAATGTCTAAGAAAGAATCCTAAGGAAAGACTCACGATGAATATGGTTGTCTCTGCATTACAAGGCTTGGCAGATGAAGATGAGTACTGCTTAACCGAATATTCTTCACCAGACAAATCATATATAGCACACGATAAGCCTGTCATGACTAGTTCACCAGGTCAAATAAAGGCTGATCCGGCGATTCAAATACAAGAACAAATTGAGAGCAAACCATTTGGTGAAGACAGAGGCTTAAGATTGGAAATTAAAGCTAGTCACGTGATAGGTCAGAATGAAGCTGATCATCTGAGACAACATGGAAAACAGATGCAGAGCAACATCCAACAGGTGGGGATGTCCAGAATGGAAACAGTTATTAATCAGATAAACGCTGATCAGAAGAGCCAGGAGCAAAAGCATATTAAGGGAAGCTTCCACATTGGAGGAGGGATGGGTAAAAAAGAAGATAAACACCAACAGGTGAGTGAGGATCAAAAACAAATGCAAGGATGCTCAAATGAGGATTTATTGAATGCAAATGAAGAAGGCAGAATCATTTTGCAAAGTTCAAAATCTTCTGTATGCTCAGTCTGCAAAAGTAGACGTCCAAATAAGGGATGGAAAAAGAAATTTACTTATGAAGAACTTTACGCCGCTACAAGTGGATTTTCAATTAAGAACACTGTATATGATGGTGACAATGGACATGTTTTCAGAGGCAACCTAGAGGGTAACCTTAAAATAGTTGTTAAGCAACATCAAATCACAAGCTTCCAGGGAGAGAAGGTGGAGTTGCTGACAAATGCCATACATGACAATGTGATCAAAGTATTGGGTTCATGCATACATGAAAGTCAATTGCTGATTGTATATGAACATGCATGCAATGGTTCGCTTGACCAGTACTTATCAGAAGCAAGTGGTAGATCATTGACATGGAGAGAAAGAATGAAAGTTGCAATAGGTGTAGCCAGAGGTCTGAAGTATCTACATGATAATCATATAATTCATGGAAGAATAAAATCAGCCAACATTCTTCTAAATCATGAGTTCAAACCCCTGCTTGGAGATTTTATGTTTGGAAAAGAAAGGTTTGAATTGAAGTATTGCTGCAAGGATAAAAATAGGGGCAATTGTGGATACAGCGCACCAGAGTATCAGGAGAGTGGAAAACAATCAAATAAGACAGATGTATATTCTTTTGGCGTAATTCTTTTAGAGCTGATCACCGGCTGTACGATTACGGAAGTATCAGGACAGAAATGTCTTATTGAATGGGCAAGGCCGCTTCTTATAGGGAGGAAGTACCTACAGTTGGTGGATCCCAAAATTGGCAGCTCCTATTATGAACAAGAACTGGATTCATTGGTCCAAGTAACAGAGAAGTGTCTTAGAAAGAATCCTGAGGAAAGGTTCACTATGAATATGGTTGCTGATGTACTGCCGGGAGTCGTTGATGGCAGTGACAGCTATGCAACTGAAGACTCATCATCAGAAAAGTCATGCATAGTATGCAGTGCCTCGAAGGTAACAAGCTCAAAAGATGATGTGCAATCACCAGCAGAGGAAGATTTAGGCACAGAGGTTGTGGAAGAAAGAGAGGACAACATAACTTGTAGTGCAAGCAATAATAAAACAGAAATTAATGAAGAGAGTGATAGCTGCTGCACAGCCTGCGTGGAGAGTGTTAAGGAAACACGAGAGATAGAAAGCTTAAGCACCAAGACATATCAAAACTGTGAATGGTGCTTGTCTTATGGGGGAGCTAGAGACTTTTTTCACAAAGGGGCTAAGGAATATACAATATGCGAAGAATTCTTTATTTTATGTAATCTATTTAAGCATTAG 4737 0.4074 MAIEGQSVVVIQDASKELHLRVFFWALNNGLSLKPADKLTLVSVLHQVYTPMGYNCPVNGGNMIEANKRIIEKVAARKIEEYLHNEELAEIAKLYESNEVEFKIRLVIGSSLKEVALTAAINLKATWLILDRQMKKDEEFVQQRLACGISRLKRNNRIVCVRGPLGPSTEIQCNSHETFDGSLPEHTHEDLFSIDVYPNKKIRVDELSQRQSRHHEEDVNTTLVINSEDIKGNQMIGETKGDKQSQDEEETESTPHEEEWGTTLVINNDQTTAHKEKKSTTENSVCSICKTRRPNTEWKREFTYDELQDATDVFSLKNCLSKSGHLSTFKGKLEGQLNIVVKQHEIKSSQAGEKIKSEVQSILKARHKNVVMLLGSTTQENFLLTVYEYGCNGSLDKYLSTPECQEKGKLSTKADVYSFGVVLLELITGRRVTDFSGEKSLVGWAKPLLGGKKYPLLVDPIISKSYEEDKLHWLVQVIEQCLKKNPKERLSMNMVVSALQGIEDSEQEYMTGPAETDQPSQEQEQEQSESVSYGKETMLRLRVENNHFYTSGQGNSDQLSQSEEQMQSRHLGEERRSGKMINNDHRIGQKVVDQLSGLEEQVKSNLYEDGNSTQKISSNYIIRQTTVDQPSHDKEQNSCFGEMQKGSRSTPTGEMINQTKAYKLIQDKAQWQRSSHENLLAAHQGEIILKNSKSSACSICKSKRPNIAWQKDFTYDELLEATEEFSIKNSLSESKDGPTFKGLLESKLKIVVKKYQITKFQEEKIFKSEAQLLSKARHKNVVMPLGLCTDKSQLMIVYEQVCNGSLDQFLSRGSFQSLTWKDRMKVATGTARGLKYLHANDIIHGSIKSSNILLTHDFEPLIGDFGFAKVKLEMKKLDKNKEASNFGYIAPEYLESGKPSSKADVYSFGVVLLELITGRRATDKLSGGKNLVGWARAMLGGKKYPQLVDPKINNSYEEEQLKWLVQVTEQCLRKNPKERLTMNMVVSALQGLADEDEYCLTEYSSPDKSYIAHDKPVMTSSPGQIKADPAIQIQEQIESKPFGEDRGLRLEIKASHVIGQNEADHLRQHGKQMQSNIQQVGMSRMETVINQINADQKSQEQKHIKGSFHIGGGMGKKEDKHQQVSEDQKQMQGCSNEDLLNANEEGRIILQSSKSSVCSVCKSRRPNKGWKKKFTYEELYAATSGFSIKNTVYDGDNGHVFRGNLEGNLKIVVKQHQITSFQGEKVELLTNAIHDNVIKVLGSCIHESQLLIVYEHACNGSLDQYLSEASGRSLTWRERMKVAIGVARGLKYLHDNHIIHGRIKSANILLNHEFKPLLGDFMFGKERFELKYCCKDKNRGNCGYSAPEYQESGKQSNKTDVYSFGVILLELITGCTITEVSGQKCLIEWARPLLIGRKYLQLVDPKIGSSYYEQELDSLVQVTEKCLRKNPEERFTMNMVADVLPGVVDGSDSYATEDSSSEKSCIVCSASKVTSSKDDVQSPAEEDLGTEVVEEREDNITCSASNNKTEINEESDSCCTACVESVKETREIESLSTKTYQNCEWCLSYGGARDFFHKGAKEYTICEEFFILCNLFKH* 1579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0842 1578 PANTHER OS01G0253100 PROTEIN 618 1084 IPR045271 GO:0004714|GO:0006468
Dod04g0842 1578 Gene3D Phosphorylase Kinase; domain 1 287 389 - -
Dod04g0842 1578 Gene3D Phosphorylase Kinase; domain 1 1159 1256 - -
Dod04g0842 1578 Gene3D Phosphorylase Kinase; domain 1 686 799 - -
Dod04g0842 1578 ProSiteProfiles Protein kinase domain profile. 1186 1447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g0842 1578 PANTHER DUAL-SPECIFICITY KINASE DOMAIN PROTEIN 1128 1466 - -
Dod04g0842 1578 PANTHER DUAL-SPECIFICITY KINASE DOMAIN PROTEIN 402 507 - -
Dod04g0842 1578 MobiDBLite consensus disorder prediction 548 566 - -
Dod04g0842 1578 PANTHER DUAL-SPECIFICITY KINASE DOMAIN PROTEIN 85 191 - -
Dod04g0842 1578 MobiDBLite consensus disorder prediction 232 266 - -
Dod04g0842 1578 PANTHER DUAL-SPECIFICITY KINASE DOMAIN PROTEIN 273 405 - -
Dod04g0842 1578 PANTHER OS01G0253100 PROTEIN 273 405 IPR045271 GO:0004714|GO:0006468
Dod04g0842 1578 SUPERFAMILY Protein kinase-like (PK-like) 298 515 IPR011009 -
Dod04g0842 1578 SUPERFAMILY Protein kinase-like (PK-like) 1170 1443 IPR011009 -
Dod04g0842 1578 MobiDBLite consensus disorder prediction 511 533 - -
Dod04g0842 1578 PANTHER OS01G0253100 PROTEIN 85 191 IPR045271 GO:0004714|GO:0006468
Dod04g0842 1578 ProSiteProfiles Protein kinase domain profile. 725 992 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g0842 1578 PANTHER OS01G0253100 PROTEIN 1128 1466 IPR045271 GO:0004714|GO:0006468
Dod04g0842 1578 PANTHER OS01G0253100 PROTEIN 402 507 IPR045271 GO:0004714|GO:0006468
Dod04g0842 1578 Pfam Protein tyrosine and serine/threonine kinase 729 989 IPR001245 GO:0004672|GO:0006468
Dod04g0842 1578 Pfam Protein tyrosine and serine/threonine kinase 401 499 IPR001245 GO:0004672|GO:0006468
Dod04g0842 1578 Pfam Protein tyrosine and serine/threonine kinase 1188 1442 IPR001245 GO:0004672|GO:0006468
Dod04g0842 1578 Pfam Protein tyrosine and serine/threonine kinase 333 400 IPR001245 GO:0004672|GO:0006468
Dod04g0842 1578 MobiDBLite consensus disorder prediction 628 653 - -
Dod04g0842 1578 MobiDBLite consensus disorder prediction 548 578 - -
Dod04g0842 1578 SUPERFAMILY Protein kinase-like (PK-like) 710 1005 IPR011009 -
Dod04g0842 1578 Gene3D Transferase(Phosphotransferase) domain 1 801 1011 - -
Dod04g0842 1578 Gene3D Transferase(Phosphotransferase) domain 1 1258 1470 - -
Dod04g0842 1578 Gene3D Transferase(Phosphotransferase) domain 1 390 527 - -
Dod04g0842 1578 PANTHER DUAL-SPECIFICITY KINASE DOMAIN PROTEIN 618 1084 - -
Dod04g0842 1578 MobiDBLite consensus disorder prediction 507 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0842 Dod-Chr4 17931815 17946485 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0842 673 992 Trihelix Transcription Factor Family AT5G38560 38.922 3.07e-60 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Dod04g0842 PK_Tyr_Ser-Thr 2.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0842 - - adu:107482356 1359.36