Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0841 ATGTCAAGCGGAGCAACACACTGGTGTTACACATGCAGGCAGCCAGTCATGCTTGAACGGGAAGATGGTATTTGTTCTTACTGTCATGGAGGCGTCGTGCTAGAACTCCATGATGAGATGCAAGGAACGGTACCCCAACACGGATTTCCATCACAAGCACAAGAGGTTCTTCAGAGGCGTAACATTAATGCGTTTATGGGGCAGAGAAAGAGAGGTCCCGGACCAAGAACTGGATTTTTAGATGCTGTTGGTAATTTCGGGAGACAGATAATGGCTGGACTGAACCCAAATTTGAGGCCTCGTCGTCGTTATGTGATAGTTCAAGGTTGTCCTCCTCCTCCCCCTCCTTTGCGTTTTGATTCTGGTGACTGCTTGTCGGGGCCTGCACCGGAAGAGCTTATTGAACAACTCACTATGAATGATAATATTAACAGGACTACTGTTCCGCCACCTGCACCTGATTCTTCAATGGATTCGCTGCCTACTATTAAGATCACGCAGTCACACCTTCGCTCTGATTCGCAGTGTCCAATTTGTCAAGAAACATTTGAATTGGGGCTCTGA 564 0.4752 MSSGATHWCYTCRQPVMLEREDGICSYCHGGVVLELHDEMQGTVPQHGFPSQAQEVLQRRNINAFMGQRKRGPGPRTGFLDAVGNFGRQIMAGLNPNLRPRRRYVIVQGCPPPPPPLRFDSGDCLSGPAPEELIEQLTMNDNINRTTVPPPAPDSSMDSLPTIKITQSHLRSDSQCPICQETFELGL* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0841 187 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RHC1A-RELATED 119 186 - -
Dod04g0841 187 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RHC1A-RELATED 2 108 - -
Dod04g0841 187 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 2 108 - -
Dod04g0841 187 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 119 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0841 Dod-Chr4 17910970 17911579 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0841 116 185 C3H Transcription Factor Family AT5G01980 37.143 7.51e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0841 K11982 - gmx:100813674 169.088