Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0816 ATGGGTCGGTGCCGAGCCGCGTCGCGCCCCGCCGACGATGACCCCAACCAAAGATCCAAGAGAAAAAGGGCTGCTTCAAATCTAGAGAATTTAGATGCTTCATCTACAGCCCAAGGAGTAACTGATGGGAAAGTATCTCTATACCACTGTAATTATTGCAACAAAGATATTTCGGGGAAGATTCGCATCAAGTGCATTGTGTGTCAGGATTTTGATCTCTGCGTAGAGTGCTTCTCTGTTGGTGCTGAGGTGACACCTCACAAAAGCAATCATCCATATAGGATTATGGGCATTGAAATGTATGGATTTGGGAATTGGAATGAAGTTGCTGAGTATGTTGGGATGAAAAGCAAATCTCAATGTATCAACCACTATAATGCTGTGTATATGAATTCACCATATTTTCCTCTTCCTGATTTGTCCCATGTTATGGGAAAGAGCCGAGAGGAACTACTTGAAATGGCAAAGAGACATGAAGTCAAGGAAGAATTTCCTCCAACTGTAGAGCTTACTCTGAAACAAGAACCTCCCTTGACTGAAGGGATAAACTCTGAAGAATCTAACAAGCCAGGAACCACTAATCAACCAGTGTGTAGGTTAACCTCAGCATGTGGCAAAGCTTACTCAAGTACAGTTAAGAAGGCTTCTGACGTAGGCCACAATGCTGATGGACTTAAGGTGGAAGTAGAATCCCAAGCAGATCGGAGCATTGGAGAGAAGAAACCAAAATTATCTAGGGAAGATAAGCCTTCTATGACTGAGTTGAGTGGATACAGTTTTAAGAGAGAGGAATTTGAAATTGAATACGACAATGATGCAGAGCAAGTATTGGCAGATATGGAATTTAAAGACACTGATACTGAAGCTGAACAAGATCAATGGGATCAAATGATTACCTTAATTCTTGTGCATAGTACAGCAATGACTTATATTTTGAAATGGAGGGAGTACTTTGCAATAAAAGCAAACTAA 972 0.4126 MGRCRAASRPADDDPNQRSKRKRAASNLENLDASSTAQGVTDGKVSLYHCNYCNKDISGKIRIKCIVCQDFDLCVECFSVGAEVTPHKSNHPYRIMGIEMYGFGNWNEVAEYVGMKSKSQCINHYNAVYMNSPYFPLPDLSHVMGKSREELLEMAKRHEVKEEFPPTVELTLKQEPPLTEGINSEESNKPGTTNQPVCRLTSACGKAYSSTVKKASDVGHNADGLKVEVESQADRSIGEKKPKLSREDKPSMTELSGYSFKREEFEIEYDNDAEQVLADMEFKDTDTEAEQDQWDQMITLILVHSTAMTYILKWREYFAIKAN* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0816 323 MobiDBLite consensus disorder prediction 229 250 - -
Dod04g0816 323 ProSitePatterns Zinc finger ZZ-type signature. 50 77 IPR000433 GO:0008270
Dod04g0816 323 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 1 292 - -
Dod04g0816 323 MobiDBLite consensus disorder prediction 229 252 - -
Dod04g0816 323 Gene3D - 98 131 - -
Dod04g0816 323 Pfam Zinc finger, ZZ type 48 88 IPR000433 GO:0008270
Dod04g0816 323 SUPERFAMILY RING/U-box 48 105 - -
Dod04g0816 323 MobiDBLite consensus disorder prediction 1 28 - -
Dod04g0816 323 Pfam Myb-like DNA-binding domain 97 126 IPR001005 -
Dod04g0816 323 PANTHER TRANSCRIPTIONAL ADAPTER ADA2B 1 292 IPR034318 GO:0003713|GO:0006357|GO:0035065
Dod04g0816 323 ProSiteProfiles SANT domain profile. 97 133 IPR017884 -
Dod04g0816 323 Gene3D - 42 97 IPR043145 -
Dod04g0816 323 SMART zz_5 44 89 IPR000433 GO:0008270
Dod04g0816 323 ProSiteProfiles Zinc finger ZZ-type profile. 45 101 IPR000433 GO:0008270
Dod04g0816 323 CDD SANT 95 126 IPR001005 -
Dod04g0816 323 CDD ZZ_ADA2 48 96 IPR041983 -
Dod04g0816 323 SUPERFAMILY Homeodomain-like 97 132 IPR009057 -
Dod04g0816 323 MobiDBLite consensus disorder prediction 1 27 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0816 1 300 EF-hand Containing Proteins AT3G07740 47.605 1.35e-96 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dod04g0816 ZZ 3e-09 CL0006
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0816 K11314 - gmx:100779424 441.81