Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0802 ATGACCTTCATCGACGACGGCATCGACCTCGACGCCTCGGACTTCGCGGCGTCGGTTCCTCTAAAGAAGGTCCCAAACGGCGACGTTTTCGAGGCGTCACGGGCGGGCGACGTGGAGCGGCTGCGGTACCTGCTGGAGTCGGGCGTGAACGTGAACGCCCGCGACCAGTGGGACTCGGTGGCCCTCTACTACGCCTGCCTCGCCGGCCACCTCGACGCTGCCCGCATGCTCCTCGAGTGCGGCGCCATCTGCTCGGAGCACACCTTCGACGGCGACCGCTGCCACTACGCCGCCCTCAACCTCAAGGTCCGCAAGCTCCTCAAGGCCTTCGAGGCCCGCCCCCCTCCCTTGGGCCCCTTGCAGGCCTCCCTCCGCGACACCTTCTTTGCCTCTCCCGCCAACCGCGCCTTCTCTGACCTCTCCGATCCCCACTCCCTTGTTCCCGGTATTTCATCAACCCAGGGGTCTAGCTGTGGCCACTTTCCTCCAGATGTGGTTTTTATTGTACAAGGAAGGCCTATTGAAGCTCACAGAGTCATATTAAGTGCAAGGTCCCCATTTTTCAAGAAAAAGTTTGAGACTGATTGGAAAGATCGCAGTGAAGTAAGATTGCCACGGGAAAAATTGTCATATCCTGCACTTTATAGTCTTATGCACTTCTTTTATTCAGACAGATTAGAGATTGCTGTGGATGACATGGAAGATCTTGTGAGAATCTGCAAAGTATGCAAATGTGAATCACTACAGAAAATCCTTGGGAAAGAAGTAGTTCATCAAAAATTTGCAGAGTATAAGGCATTGACAGATGTAGATAATTCTCAGAAGCGGTACATTTTACAAGGTCTATCCCTTCCAGTAGAAGACAGGCTTCCTGCAGCCTTGCGTCGAATCCTTCTGACTGCCCTTTCAAATTCAACCCATGAAAATGGTCAAGATGATGGACTTGATAAACTCGTTTCTAAGGTTGGTGCTATGCAGATTGGTAAACCTGTTGATGATCTGGCTGATGTATGTGTAAGAGTTGACAGAAGAGTTTTTCGCTGCCATCAAGTTATTCTAGCATCAAGGTCTGAATATTTTAGGGCAAGACTGTCACATATTAAGGACTTCCATGGAGGGAGAGATGGGTTATCTCTTGATTCCCTTCCTTGTCTTGAAGAACATGACTTGAGCACAGAAGCATTTGAGAAAATGATTGAATATATGTACACTGATGGTTTGCAGGATATAAACCCAGACCAGGCTGAGGAAATGTTCGATGCTGCTTCTAGATACTTATTGTTTCCTCTTAAGCGTGCTGTGGCTGATGTCTTGTTGCCACACTTGGAAATGGCATCACCTGAAGAACTTTGCCATTGGTTAACATTAGCAGACATGTATGGTGTTTTCAAGATTCGGGAATATTGTCTAGACACCATTGCTTGTAACTTTGAAACATTCGCTGATACAAAAGAATTCCGGGCAATGCTATTGACTTTGCCTCCACCATCGGGAGACTCCTCGCTTCGTACCACTGTCCCAAGCATGCCTGGATCTAATCTGAATACTGATCAAGGAAATCTTCTTGATGATTTACGCGAGAAATGGCTTGAAATCGAAGCTGCTGAGCTTGACCAGAGAGATGAGAGTGCGTTGCAGTTTGACAAGCGCCTTGAGATGCTTATGCTTGTTGCTGAGCGAGAAAAATCAAGCAATTCTGATGCTGATGACAATGACGACCTCAAACCCTTGGCTTTCTCCCCAGACGCCACTCTAATTTCAGGTGAACAGAAAGAAAGAACTGTAGATTTCTGA 1794 0.4822 MTFIDDGIDLDASDFAASVPLKKVPNGDVFEASRAGDVERLRYLLESGVNVNARDQWDSVALYYACLAGHLDAARMLLECGAICSEHTFDGDRCHYAALNLKVRKLLKAFEARPPPLGPLQASLRDTFFASPANRAFSDLSDPHSLVPGISSTQGSSCGHFPPDVVFIVQGRPIEAHRVILSARSPFFKKKFETDWKDRSEVRLPREKLSYPALYSLMHFFYSDRLEIAVDDMEDLVRICKVCKCESLQKILGKEVVHQKFAEYKALTDVDNSQKRYILQGLSLPVEDRLPAALRRILLTALSNSTHENGQDDGLDKLVSKVGAMQIGKPVDDLADVCVRVDRRVFRCHQVILASRSEYFRARLSHIKDFHGGRDGLSLDSLPCLEEHDLSTEAFEKMIEYMYTDGLQDINPDQAEEMFDAASRYLLFPLKRAVADVLLPHLEMASPEELCHWLTLADMYGVFKIREYCLDTIACNFETFADTKEFRAMLLTLPPPSGDSSLRTTVPSMPGSNLNTDQGNLLDDLREKWLEIEAAELDQRDESALQFDKRLEMLMLVAEREKSSNSDADDNDDLKPLAFSPDATLISGEQKERTVDF* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0802 597 CDD BTB_POZ_ZBTB_KLHL-like 334 425 - -
Dod04g0802 597 Gene3D Potassium Channel Kv1.1; Chain A 325 474 IPR011333 -
Dod04g0802 597 Gene3D Potassium Channel Kv1.1; Chain A 154 278 IPR011333 -
Dod04g0802 597 ProSiteProfiles BTB domain profile. 163 230 IPR000210 GO:0005515
Dod04g0802 597 MobiDBLite consensus disorder prediction 560 576 - -
Dod04g0802 597 CDD BACK 446 489 - -
Dod04g0802 597 Gene3D - 2 135 IPR036770 -
Dod04g0802 597 Pfam Ankyrin repeats (many copies) 31 78 IPR002110 GO:0005515
Dod04g0802 597 SMART BTB_4 335 442 IPR000210 GO:0005515
Dod04g0802 597 SMART BTB_4 163 260 IPR000210 GO:0005515
Dod04g0802 597 ProSiteProfiles Ankyrin repeat profile. 32 56 IPR002110 GO:0005515
Dod04g0802 597 PANTHER ANKYRIN REPEAT AND BTB/POZ DOMAIN-CONTAINING PROTEIN 1 7 558 IPR044515 -
Dod04g0802 597 MobiDBLite consensus disorder prediction 560 597 - -
Dod04g0802 597 SUPERFAMILY POZ domain 332 441 IPR011333 -
Dod04g0802 597 Pfam BTB/POZ domain 162 258 IPR000210 GO:0005515
Dod04g0802 597 Pfam BTB/POZ domain 333 438 IPR000210 GO:0005515
Dod04g0802 597 ProSiteProfiles BTB domain profile. 335 411 IPR000210 GO:0005515
Dod04g0802 597 SUPERFAMILY POZ domain 160 251 IPR011333 -
Dod04g0802 597 SUPERFAMILY Ankyrin repeat 30 108 IPR036770 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Dod04g0802 BTB 7.7e-14 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0802 K10520 - qsu:111999987 921.383