Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0770 ATGGATGTGGCTAAGTTAAAGAACTCTGATGATAACAAGAAGCAAGAAGAAGTTGTGCTTCCTGGGTTTAGATTCCATCCCACAGATGAAGAGCTTGTCGGCTTTTATCTGCAGCGGAAGGTGGAGAATAAGCCTCTTCGAATTGAACTCATCAAACAAGTTGACATCTACAGATATGATCCATGGGATCTTCCAAAAGTGAATTCAATGGGGGACAAAGAATGGTACTTCTTCTGCAGAAGAGGAAGAAAGTACAAGAATAGCATAAGGCCTAACAGGGTGACAAAGTCTGGATTCTGGAAAGCCACAGGGATTGACAAGCCCGTATATTGTGTGAAAGAACCCCAAGAATGCATTGGCCTCAAGAAGTCCTTGGTCTACTACCGTGGAAGTGCTGGAAAAGGCACCAAAACTGATTGGATGATGCACGAGTTTCGCCTTCCACCCAGTGGGAAATCCAACAATAATATTCCACCAGCTAATGCTAGCGATGACGTTCAAGAAGCTGAAGTGTGGACGCTATGCAGGATATTCAAACGCATCTCATCTTACAAAAAGTACAGACCAAATGTGAAAGGCTCATCAGCATCAGTCACCAAACCAAACGCTGAAGACTCCTCAAGTTCAAAGTCATACTTGACTTTCAGAGATCATTCCGTAGTTATGCAACATGTTGAAAGGAAACGGGCTATTGGACATGTTGATGAAAGGAAATTTCTGGGCCAGTTGGGGCCTGTGGCTCAAGCTCCATCAACAGTGTCTTACCCAAGTTATTGGAATCAGAATGTTCCGGATGCAGTTACAAATGAGAACTGGGATGAACTCAGATCTGTGGTTCATCAGTTTGCGATTGATCCATCCTCTGTTGGTGATTGTAGAGAAACATATCTCCCACCCTCCTTTTCCTAG 909 0.4378 MDVAKLKNSDDNKKQEEVVLPGFRFHPTDEELVGFYLQRKVENKPLRIELIKQVDIYRYDPWDLPKVNSMGDKEWYFFCRRGRKYKNSIRPNRVTKSGFWKATGIDKPVYCVKEPQECIGLKKSLVYYRGSAGKGTKTDWMMHEFRLPPSGKSNNNIPPANASDDVQEAEVWTLCRIFKRISSYKKYRPNVKGSSASVTKPNAEDSSSSKSYLTFRDHSVVMQHVERKRAIGHVDERKFLGQLGPVAQAPSTVSYPSYWNQNVPDAVTNENWDELRSVVHQFAIDPSSVGDCRETYLPPSFS* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0770 302 Gene3D NAC domain 28 185 IPR036093 GO:0003677|GO:0006355
Dod04g0770 302 MobiDBLite consensus disorder prediction 190 209 - -
Dod04g0770 302 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 294 - -
Dod04g0770 302 Pfam No apical meristem (NAM) protein 21 147 IPR003441 GO:0003677|GO:0006355
Dod04g0770 302 PANTHER - 3 294 - -
Dod04g0770 302 SUPERFAMILY NAC domain 17 179 IPR036093 GO:0003677|GO:0006355
Dod04g0770 302 ProSiteProfiles NAC domain profile. 19 180 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0770 Dod-Chr4 13828268 13832263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0770 9 229 NAC Transcription Factor Family AT5G39820 50.000 1.07e-75 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod04g0770 NAM 3.4e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0770 - - gmx:100819795 441.81