Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0747 ATGATTGACCCTTATTGGGCGGTGATACCAGTGATGCTTGTTCACTACTATGCAAGTCACCCTTTGGGCGAGTATGATTGGTGGAGGTCAAGGATCGTGGTTTTGCTGACTTGGGTGTGGAGTGTGAGGCTCACTCATAGCTACTTCAGGAGAGAGAGGTGGCAATTGGGTGCAAGAGAGGATTGGCGTTTCACTGATGAGCCAGCAGTATGGGAAGCAATGGTGGTGGATTTCATTCTTTGCTGTCTATGTCTACCAGCAGCATTAAGAACGAAAAAGAGGGACAATGTTGCGAAGTCAGATAAAGGAAAATATCAGCAACTGAGCTCTTGTTCAATGTTTTTGCCTAGAAAAGCATTAAGAACGAAAAAGAGGGACAGTGTTGCCAAACTAGATAAAGGAAAAAGGGAGCGACTAAGATCATTGGATTCACAATGCAAAACAACAGTCTCCCTGTATCTGGGGTTTGTGAAGATGATCTCAAAAATCATTAACTTCAACAACACAGGTCATATGGAGGTCTTACAGGACATGAAATTCAGGTACGCATTCTCCTCTCCATCTATCCAAACTCAAATGGCCACGCTCCATTACTTCCCCACCTTCGAAGCCGCCACCGACGACCCTCTCTTACCCTTTCTCAGGTCTGTCAAGGAAGCTCTAGAAGATTCCAGCAGTTCGGGTCAGAACCTCAGCGAGTTACTCAGAGACTGCATCACCAACTTCAGGGGCAGCGACCGGTACCGAAACGACATCAGATTTCTCAAGATTTGGCTCCTCTATATGGGTGTTAGTTCAGATTATGATAGTGTTTTCAAAGAAATGCTGAACAGCAAAGTGTGTGCCAACAATTCTTCCCTCTATGTGTGGTCTGCATGTCTTTTTGAGTCAAAAGGGAGGTTTCGTGATGCCCTCACAATCTATAAGCTTGGTATTTCCAGGAATGCAAAGCCAATTGACTGGTTGAAGAAGGCGCAAACCTTATTTCTCAGCAGAATATCTGAAATTTTGAGTGCTGCTTCTAGTCACAAGATTGATGATAAAGGATCCACGGAGTTGGGAAACGATGGCAATAATCCATGGGATACCTCCACCATGCCCCTGCAGATTGATGATAAAGGATCCATGGAATTGGGAAACGATGGCATTAACCCATGGGACACCTCCACCATGGATTACATGCTGAAGAAGATAGCACATTTAATTACAAAATTTGATGGGTATCATTTGAGCTCTAAATCTTACACAGGAAAAGTGGCCTTATCTACTTTGAAGAATGCGTCAAGGAATAAAGTTATAGAGATAGGTGGAAAAAAATACCATATCAAAGGTTGTGCTGGACAGGGTGGTTTTGCTCAAGTATATAAGGCCCATGTCAACAGTGATCCAAACGATGTTGTTGCACTGAAGATACAAAAGCCAGCTTTCAGTTGGGAATTTTATATGTATCGTCAGCTTGATCAGCGTGTCTTAGGCAGAGAAAGGTCAAGCTATGGTTCTGCTCATAGAATTCATCTCTATTCTGACTGCAGCATACTCATCTGTGACTATTTAGCTCATGGGACGCTACAGGATGTCATAAACTCATATGTGGTCCTAGGCAAGTCCATGGAAGAAGTGTTATGCATTTATTACACAATAGAAATGTTACACATGGTTGAAACTTTGCATGATGTTGGATTGATTCATGGTGATTTCAAGCCTGATAATCTGCTTATTCGCTATGCTAGAGGTGCCCTTACTGAAGATGGGTTCTTGGACCGAAGTGGTCCTTGGTGTGATCAGGGTCTTTGCCTTGTAGACTGGGGAAGAGGGATTGATCTGCATCTCTTTCCAGATCACACAGTATTCAAGGGAGATTGCAGAACTTCTGGATTTCGCTGTATTGAGATGCAAGAGGATAAGCCATGGAAATTTCAGGCAGACGCATATGGCCTTTGCGTTGTTGTCCATATGATGTTGCATAGTATCTATATGGAGATTGTCAAAAAAGAATCACCTGATGGAGGCTATGTGTATCTTCCCAGACTACCCTTTAAACGTTACTGGAACACTGAGCTCTGGAAGAATTTCTTCACTAAGATGCTAAATGAATACCCCGGCAAAGATGATAGAAGGTTGCTGCAGGAATTGAAGAAGTCCTTCCTGGACTACATGGGTTCCGATCCCAAGCTGATAAAGACACTGAAGGAGTTACTCGTAAAGCAGAGGGCTTCCTTGTGTACTGCTTAG 2232 0.4337 MIDPYWAVIPVMLVHYYASHPLGEYDWWRSRIVVLLTWVWSVRLTHSYFRRERWQLGAREDWRFTDEPAVWEAMVVDFILCCLCLPAALRTKKRDNVAKSDKGKYQQLSSCSMFLPRKALRTKKRDSVAKLDKGKRERLRSLDSQCKTTVSLYLGFVKMISKIINFNNTGHMEVLQDMKFRYAFSSPSIQTQMATLHYFPTFEAATDDPLLPFLRSVKEALEDSSSSGQNLSELLRDCITNFRGSDRYRNDIRFLKIWLLYMGVSSDYDSVFKEMLNSKVCANNSSLYVWSACLFESKGRFRDALTIYKLGISRNAKPIDWLKKAQTLFLSRISEILSAASSHKIDDKGSTELGNDGNNPWDTSTMPLQIDDKGSMELGNDGINPWDTSTMDYMLKKIAHLITKFDGYHLSSKSYTGKVALSTLKNASRNKVIEIGGKKYHIKGCAGQGGFAQVYKAHVNSDPNDVVALKIQKPAFSWEFYMYRQLDQRVLGRERSSYGSAHRIHLYSDCSILICDYLAHGTLQDVINSYVVLGKSMEEVLCIYYTIEMLHMVETLHDVGLIHGDFKPDNLLIRYARGALTEDGFLDRSGPWCDQGLCLVDWGRGIDLHLFPDHTVFKGDCRTSGFRCIEMQEDKPWKFQADAYGLCVVVHMMLHSIYMEIVKKESPDGGYVYLPRLPFKRYWNTELWKNFFTKMLNEYPGKDDRRLLQELKKSFLDYMGSDPKLIKTLKELLVKQRASLCTA* 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0747 743 Pfam Mad3/BUB1 homology region 1 205 312 IPR013212 -
Dod04g0747 743 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 364 742 IPR015661 GO:0007094
Dod04g0747 743 ProSiteProfiles Protein kinase domain profile. 440 740 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g0747 743 PANTHER BUB1 KINASE, ISOFORM A-RELATED 205 334 - -
Dod04g0747 743 ProSitePatterns Serine/Threonine protein kinases active-site signature. 561 573 IPR008271 GO:0004672|GO:0006468
Dod04g0747 743 SMART mad3_bub1_i 202 312 IPR013212 -
Dod04g0747 743 Pfam Protein kinase domain 440 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g0747 743 SUPERFAMILY Protein kinase-like (PK-like) 437 700 IPR011009 -
Dod04g0747 743 SMART serkin_6 440 716 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g0747 743 Gene3D - 202 348 - -
Dod04g0747 743 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 205 334 IPR015661 GO:0007094
Dod04g0747 743 Pfam Protein of unknown function (DUF1295) 1 76 IPR010721 -
Dod04g0747 743 ProSiteProfiles BUB1 N-terminal domain profile. 197 371 IPR013212 -
Dod04g0747 743 Gene3D Transferase(Phosphotransferase) domain 1 437 740 - -
Dod04g0747 743 PANTHER BUB1 KINASE, ISOFORM A-RELATED 364 742 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0747 Dod-Chr4 12948359 12961265 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0747 434 573 MAP Kinase Kinase Kinase Kinase AT3G15220 32.192 6.08e-08 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK BUB Dod04g0747 Pkinase 6.8e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0747 K02178 - gmx:100783171 850.121