Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0709 ATGAGCTGCTATTCCCCTGCTTATTCTCATCACGGATTAACAACAACACCACCACCACGACCAACGCCAACCCACTGTTATAATTTTTATTATTACCCATTCAACGGAACGAAACCCGCCAAGTACCCGACCCGAAGGCTGGTGGCGAAGGCGGCAGCCTCATCCTCTGCTGGCGGCGGCGATGGATTTGCGGCGGAATCAAGAGAGAGCTTGTACGAGGTGCTGGGGGTGGCGGACTCGGGGACGGTGGGGGAGGTGAAGCAGGCGTACAAGCAGATGGCCCGGAAGTACCATCCGGACGTGTCGCCACCGGGTCGGGTGGAGGAGTACACGAGGAGGTTCATTCTGGTGCAGCAGGCCTACGAGACCCTCTCTGATCCCGCGAGAAGAGCACTCTATGACAGAGACATGGCCAAGGGCCTTCACTTTGCCTTCTCCGCTCGACGCCCATTCCACTATGGCGTTCATCAGGTGACGCAACAAAGAAATGAATGGAAAACTCGCTGGCAGTCACAACTGTCCGAGCTGAATAGAAGAAGCAAGTGCAAGATTGGTGGAGGGAATATGTCTTGGGCAGCTCGAATGCGTAATAAGCAGAGAGATGAATTAGTAAATGTATTATGA 624 0.5401 MSCYSPAYSHHGLTTTPPPRPTPTHCYNFYYYPFNGTKPAKYPTRRLVAKAAASSSAGGGDGFAAESRESLYEVLGVADSGTVGEVKQAYKQMARKYHPDVSPPGRVEEYTRRFILVQQAYETLSDPARRALYDRDMAKGLHFAFSARRPFHYGVHQVTQQRNEWKTRWQSQLSELNRRSKCKIGGGNMSWAARMRNKQRDELVNVL* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0709 207 CDD DnaJ 72 126 IPR001623 -
Dod04g0709 207 Gene3D DnaJ domain 61 150 IPR036869 -
Dod04g0709 207 PANTHER CHAPERONE PROTEIN DNAJ 20, CHLOROPLASTIC 37 201 - -
Dod04g0709 207 Pfam DnaJ domain 71 134 IPR001623 -
Dod04g0709 207 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 37 201 - -
Dod04g0709 207 ProSitePatterns Nt-dnaJ domain signature. 114 133 IPR018253 -
Dod04g0709 207 PRINTS DnaJ domain signature 109 129 IPR001623 -
Dod04g0709 207 PRINTS DnaJ domain signature 72 90 IPR001623 -
Dod04g0709 207 PRINTS DnaJ domain signature 90 105 IPR001623 -
Dod04g0709 207 PRINTS DnaJ domain signature 129 148 IPR001623 -
Dod04g0709 207 SMART dnaj_3 69 129 IPR001623 -
Dod04g0709 207 SUPERFAMILY Chaperone J-domain 67 144 IPR036869 -
Dod04g0709 207 ProSiteProfiles dnaJ domain profile. 70 137 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0709 Dod-Chr4 11436163 11439065 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0709 72 134 C2H2 Transcription Factor Family AT1G74250 40.909 1.56e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0709 - - gmx:100101903 200.675