Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0706 ATGGCATTGTGTAACAAGCTCGGAAATCTCTTGAGGCAGAGTGCTTCTCAAAGCGGCCAAGCACCTCTTCCGTCCATGCTTAATTATATTCGCTGCATGTCATCGAGCAAGCTTTTTATTGGAGGCCTCTCATATGGGACTGATGACCAGTCTCTTAAGGATGCATTTGCCAGCTTTGGAGATGTGGTTGAGGCAAAGGTTATCACTGACAGAGACACTGGAAGGTCAAGGGGATTTGGATTTGTCAACTTCGCCAGCGATGAGTCAGCGAGCTCAGCACTCTCTTCTATGGATGGGCAGGATCTAAATGGCCGGGTCATTAGGGTGAGCTATGCTAATGATAGGCCTTCTGGACCTCGGCCTGGTGGTGGCGGTTATGGTGGCTCCGGCAGTTATGGTGGTGGCTACCGGAGGGGTGGAGGCGGAGGTGGGAATTTTGGTGACCCAGTCTTTTAA 456 0.511 MALCNKLGNLLRQSASQSGQAPLPSMLNYIRCMSSSKLFIGGLSYGTDDQSLKDAFASFGDVVEAKVITDRDTGRSRGFGFVNFASDESASSALSSMDGQDLNGRVIRVSYANDRPSGPRPGGGGYGGSGSYGGGYRRGGGGGGNFGDPVF* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0706 151 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 3 MITOCHONDRIAL 1 147 - -
Dod04g0706 151 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 36 114 IPR000504 GO:0003723
Dod04g0706 151 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 1 147 - -
Dod04g0706 151 MobiDBLite consensus disorder prediction 111 151 - -
Dod04g0706 151 SUPERFAMILY RNA-binding domain, RBD 30 144 IPR035979 GO:0003676
Dod04g0706 151 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 38 108 IPR000504 GO:0003723
Dod04g0706 151 SMART rrm1_1 37 110 IPR000504 GO:0003723
Dod04g0706 151 Gene3D - 13 147 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0706 Dod-Chr4 11307954 11310152 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0706 35 124 Eukaryotic Initiation Factors Gene Family AT1G49760 40.000 3.69e-14 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0706 - - gmx:100527220 187.578