Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0698 ATGCATCTCCCGTTTCTAAGATCAACAACATATGCCACCATGGTTTTTCCAAAACCACCTTCTCAACCTGATTTCTTTCTTCAATCAAACTTCGCTTGCCGCCATGCCAGGGACTCTCTTCCAAGGTTGAGGATGCCGGAGAAATCGATGCGAAAGGAGGCTGCGTACAAGAGCATACACGATGAGCTGAAACTTGATGCAAACCCAATGCTGAACTTGGCTTCCTTTGTGACCACATCCATGGAGGAAGAATGTGACAAGCTCATGATGGAATCAGTCAACAAGAACTATGTTAACATGGATGAGTACCCTGCCACTGCTGACCTTCATAATCGGTGTGTGAACATGATAGCAAGTTTGTTCAACGCTGAAATTGGAGAAAATGAGACTGCAATTGGAGCTGGAACCGTTGGATCATCAGAGGCTATAATGCTGGCAGCCCTTGCATTCAAGAAAAAGTGGCAGAACAAGCGAAAGGCCGAAGGCAAGCCATATGATAAGCCCAACTTGGTCACTGGTGCCGACGTGCAGGTTTGTTGGGAGAAATTTGCGACGTATTTCGATGTGGAGTTGAGGAAAGTGGAGGTGAGGGAAGGCTACTACGTGATGGACCCTGCTAAAGCCGTTGAGATGGTAGACGAGAACACTATTTGCGTGGCTGCAATCTTGGGTTCAACTTATAATGGGGAATTCGAAGATGTCAAACTGCTTAATGACCTGCTGCTAGAAAAAAACAAGCAAACTGGATGGGATACGCCTATTCATGTTGATGCTGCTAGTGGTGGCTTTGTTGCTCCTTTCCTTTATCCAGAGCTAGAATGGGATTTCAGACTTCCATTGGTGAAGAGCATAAATGTTAGTGGCCACAAGTATGGCCTTGTTTATGCTGGAATCGGTTGGGTTGTATGGAGTAGCAAGGAGGACTTGCCTGAAGACCTTATCTTCCATATTAATTACCTTGGAGCAGACCAACCCACCTTCACCCTGAACTTTTCTAAAGGTTCTAGTCAGATCATCGCGCAATACTATCAGCTAATTCGCCTTGGCAGAGAGGGATACCGGAGTGTAATGGAGAACTGCAGAGAAAATGCCATGTTTCTGAAAGAAGGATTGGAGAAGACCGGATGCTTCAACATACTCTCAAAAGACAATGGTGTTCCTGTGGTAGCATTTTCACTGAAGGACAGAAGAATTCATGATCACGATGAGTTCATGATATCAGCCATGTTGCGCCGCCACGGCTGGATGGTGCCGGCTTATCCAATGCCACCTGGTGCTCAGCACATCAACGCGCTCCGTGTGGTGGCTCAGGGCTGA 1317 0.467 MHLPFLRSTTYATMVFPKPPSQPDFFLQSNFACRHARDSLPRLRMPEKSMRKEAAYKSIHDELKLDANPMLNLASFVTTSMEEECDKLMMESVNKNYVNMDEYPATADLHNRCVNMIASLFNAEIGENETAIGAGTVGSSEAIMLAALAFKKKWQNKRKAEGKPYDKPNLVTGADVQVCWEKFATYFDVELRKVEVREGYYVMDPAKAVEMVDENTICVAAILGSTYNGEFEDVKLLNDLLLEKNKQTGWDTPIHVDAASGGFVAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWSSKEDLPEDLIFHINYLGADQPTFTLNFSKGSSQIIAQYYQLIRLGREGYRSVMENCRENAMFLKEGLEKTGCFNILSKDNGVPVVAFSLKDRRIHDHDEFMISAMLRRHGWMVPAYPMPPGAQHINALRVVAQG* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0698 438 Gene3D - 14 78 - -
Dod04g0698 438 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 30 436 IPR010107 GO:0004351|GO:0006536|GO:0030170
Dod04g0698 438 Pfam Pyridoxal-dependent decarboxylase conserved domain 46 394 IPR002129 GO:0016830|GO:0019752|GO:0030170
Dod04g0698 438 Gene3D - 79 373 IPR015421 GO:0003824
Dod04g0698 438 Gene3D - 374 438 - -
Dod04g0698 438 SUPERFAMILY PLP-dependent transferases 33 435 IPR015424 -
Dod04g0698 438 PANTHER GLUTAMATE DECARBOXYLASE 14 436 IPR010107 GO:0004351|GO:0006536|GO:0030170
Dod04g0698 438 PANTHER GLUTAMATE DECARBOXYLASE 14 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0698 Dod-Chr4 10723220 10727569 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0698 14 437 Calmodulin-binding Proteins AT5G17330 77.594 0.0 694
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0698 K01580 - gmx:100782330 739.184