Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0693 ATGGAAGGAAGGTCAGGACCAGAAAGTGTAGCTCCGCCTCCGTTCTTGGTAAAGACGTATGAGATGGTGGATGATTCATCAACCAATGAGATTGTATCTTGGAGCCCAACCAACAATAGCTTCATTGTTTGGGACACCGGATTTCGAAAAACAAATCCTCAGCAATGGGAGTTCGCTAATGACAATTTTGTGAGAGATCAAAAGCATCTTCTTAAGAACATTCGTCGCAAGCAGCCTGTCTATAGTCACAGCCATCCACCAAGCTCACTCATGGATCTTGAGATGGCAGCATTTGAGGAGCAAATACAGAAACTGACACAGGAGAAATATGCTATGGAATCTCACATCATTAGCTTCAAGCAACACCAATCAGCTGCAAGGCTTCATTTGGAAGATCTAATGCAACGATTAGATGGCATGCAGAGGAGACAAAACAATTTGCTCGACTTCTTTGAAAAGGCTCTTCAAAATCCCAATGTTGTCGAACATATTTCTCACAACATTGGTATGGCCTTGGACTCATTAGCTTATAACAAGAAGAGAAGATTTCCTTATATTGATAGTAACTTCATTGACAATCATAATGGCTATATATTAGAAGTCGAGAATTTTTTTAATGAAGATTTCTCAAATAAATTCAAAGAGGAAATGTCACCAAATGTTTCGGACATAAACTTGGTGTTGCCTAGACAACAAAGTTCATATGATGATGGGGAAATCCCATACGAGATGCTATTTCAAAGTGAACCAAAAGGAATACTGACAGGATCAAATCTTCCATTTACACCTAATGATTTGTTGGAGATTGAAGATATTGGTTCACCAACAGCAACAACAGGATGTGAGAGCCCTAAATTGCACTTGTTGGACCCTAGTAGTGAAGAATATGATAGCCATATACCTTGCCTTCACACTCTAACTCAGGCATCTTCTCCATTGAAAGAGAATGGAAACTCATATTTTGTTGAATCACCCCAAATAGACTATCAAGAACTTGAGAAATTAGAAGAGTTGAGAATCGCTAATGATATAGAATCTGGTGGTTTTACTTCTTCCAAGAGGAATATAGCGAATGGGGATGCAAATTTAGTTTTGTCACAAGCGGTTTCAAGTAACAATCAAGGGAACCCAAGTCAAGTAAGAACAGTAAATGATGAGTTTTGGGAGAAGTTCTTTACAGATTGA 1185 0.3873 MEGRSGPESVAPPPFLVKTYEMVDDSSTNEIVSWSPTNNSFIVWDTGFRKTNPQQWEFANDNFVRDQKHLLKNIRRKQPVYSHSHPPSSLMDLEMAAFEEQIQKLTQEKYAMESHIISFKQHQSAARLHLEDLMQRLDGMQRRQNNLLDFFEKALQNPNVVEHISHNIGMALDSLAYNKKRRFPYIDSNFIDNHNGYILEVENFFNEDFSNKFKEEMSPNVSDINLVLPRQQSSYDDGEIPYEMLFQSEPKGILTGSNLPFTPNDLLEIEDIGSPTATTGCESPKLHLLDPSSEEYDSHIPCLHTLTQASSPLKENGNSYFVESPQIDYQELEKLEELRIANDIESGGFTSSKRNIANGDANLVLSQAVSSNNQGNPSQVRTVNDEFWEKFFTD* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0693 394 Pfam HSF-type DNA-binding 15 46 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod04g0693 394 Coils Coil 88 115 - -
Dod04g0693 394 Gene3D - 47 78 IPR036388 -
Dod04g0693 394 Gene3D - 8 46 IPR036388 -
Dod04g0693 394 SUPERFAMILY "Winged helix" DNA-binding domain 11 77 IPR036390 -
Dod04g0693 394 SMART hsfneu3 11 77 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod04g0693 394 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 11 394 IPR027725 -
Dod04g0693 394 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-5 11 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0693 Dod-Chr4 10646937 10649322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0693 15 394 HSF AT4G13980 38.571 2.25e-80 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Dod04g0693 HSF_DNA-bind 2.4e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0693 K09419 - gmx:100816484 383.259