Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0668 ATGGTTACTTTTGGAAGTTGTTTCACTTACAAAAGAACAGAGAACCGTTTGCTTATGGTTTCAATCCTCAAATTTCGTAGCATATATGGTTCCTTGAGATGCTTTCATTCTATTTCAAAATGGGGTTCCAGTGCCTTGGATAAAAATCAGGAATTGGCATCGAATGGGAATCATAACAGGGTGGGGCTTTTCTGGGACTTAGATAACAAACCACCGAACTCAATTCCACCTTATGAAGTTGCCAATAAGCTTAGAATAGCTGCATCTTCCTTTGGAGTTGTTAGGCACATGGTGGCCTATGCAAATAGCCACACCTTCAGCCATGTTCCCCTTCCTGTCAGGGAGAGGAAGAAACAGAGGGAACTGTTGAATCGTTTAGAGAACAAGGGCGTTATCAAGCCGAATGAACCTTATGTTTGTAGGGTTTGTGGTAGAAAGTTTTACACCAATGAGAAGCTTGTTAACCATTTCAAGCAATTACATGAGCGCGAGCACGCGAAAAGGTTAAACCAGATAGAGTCAGCAAGGGGAAGTAGGAGGGTCAAGTTGGTTGCGAAGTATTCGATGAAGATGGAGAAGTATACGAAGGCTGCAAGGGATATTCTGACACCCAAAGTGGGGTATGGTTTGGCAGATGAGCTGAAACAGGCGGGGTTTTGGGTTCAGACCGTGTTGGATAAGCCACAGGCTGCGGATCGCGCGTTGGAAAGTCACATGGTGGATATGATGGATCATAGGAGGGTTGAGTGTGTGGTACTTGTGTCAGATGATTCTGATTTTGTTAATGTGATAAAGGAAGCTAAGCTACGGTGTCTCAAGACAGTCATCATTGGGGATACTAATAATGGAGTGTTGAAGAGGGTTGCTGATGCTGCCTTTTCTTGGGAAGAAATCCTGATGGGTAAGGCCAAAAAGGAGGCTGTAACGGTTGTGGAGAACTGGAAGGATCGTGATATTTTGAAAAGGTTAGAGTGGACATACAACGCAGAGGTGGACAAAAAGAAATTTGATCTAGATGATACAGCTACGGAAGCATCTGAAGATGAGAACATTGAAGATATTTGCGATGAAGCTGATGATGACTATAAGAATGACAGAGGTGCTTGGTGGGAATTAGATTCTGATGAAGGACTATCAATTCAGCCCAATTTTGGGGGCTGGTCCCCAAGCCCCACATTTCAAGCTCCTGTATCTGTTTAG 1200 0.4375 MVTFGSCFTYKRTENRLLMVSILKFRSIYGSLRCFHSISKWGSSALDKNQELASNGNHNRVGLFWDLDNKPPNSIPPYEVANKLRIAASSFGVVRHMVAYANSHTFSHVPLPVRERKKQRELLNRLENKGVIKPNEPYVCRVCGRKFYTNEKLVNHFKQLHEREHAKRLNQIESARGSRRVKLVAKYSMKMEKYTKAARDILTPKVGYGLADELKQAGFWVQTVLDKPQAADRALESHMVDMMDHRRVECVVLVSDDSDFVNVIKEAKLRCLKTVIIGDTNNGVLKRVADAAFSWEEILMGKAKKEAVTVVENWKDRDILKRLEWTYNAEVDKKKFDLDDTATEASEDENIEDICDEADDDYKNDRGAWWELDSDEGLSIQPNFGGWSPSPTFQAPVSV* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0668 399 PANTHER ZINC FINGER (C2H2 TYPE) FAMILY PROTEIN 44 377 - -
Dod04g0668 399 PANTHER - 44 377 - -
Dod04g0668 399 ProSiteProfiles Zinc finger C2H2 type domain profile. 138 166 IPR013087 -
Dod04g0668 399 SUPERFAMILY beta-beta-alpha zinc fingers 134 164 IPR036236 -
Dod04g0668 399 ProSitePatterns Zinc finger C2H2 type domain signature. 140 161 IPR013087 -
Dod04g0668 399 Pfam NYN domain 210 291 IPR021139 GO:0004540
Dod04g0668 399 Gene3D - 52 299 - -
Dod04g0668 399 CDD PIN_LabA-like 148 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0668 Dod-Chr4 10032713 10035287 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0668 60 379 C2H2 Transcription Factor Family AT4G12240 61.212 1.35e-147 421
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Dod04g0668 NYN 2.1e-07 CL0280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0668 - - lang:109328008 598.971