Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0649 ATGTGGGGCAAGATGTTGAAATCCTTGAGGAAGAGCCTGAGCCTTCAATCAAACTGTATCAAGCACAAGGGTCAAGTTGATGGTACTGTGTCAGTGCACGGTGAAAACTTGGCTGTGTTGCCTGTGCAGTGGGCAAACTGCAATATTTGCTTAGAAGAAAGCAAACATTGCAATTGTGACCACATCAATGCTGAGGATACAAAGAGTACTGCAGCAGAAGGCGCCAATGTCAACAACACCGAGCATGATGCTGAAGCCAATAGTTCTTTCGTTCATGCTGTCATAAACATGGTGGGGATGCTCATAGGTTTGGGGCAATTATCAACCCCATATGCTGTGGAAAAAGGTGGTTGGGCATCTTCATTTATGCTCATAGGACTCGGGTTGATGTGCACTTACACTTCCATTGTGCTTGGAAAATGCCTTGAAAAGAATCCCAAGTCAAGAAGCTACGTTGATATTGGGGCCCATGCATTTGGATCAAAAGGAAGACTCCTAGTATCAACATTCATCTACATGGAGATATTCATGGCCCTTGTTTCCTACACCATCTCACTACACGACAACTTGATCACAGTGTTCTTGGGGACACACATGAAGTTGCACTTTGCTAAATTGTCAACTTCCCAGCTCCTAACCATAGTGGCTATCTTGATTGCCCTTCCTAGTTTGTGGATCAGGGATCTCTCTAAAATATCTTTCCTTTCAACCGTTGGTATTCTCATGTCTCTTGTTATTTTCGTCTCTGTAGCCGCCACTGCAGTTTTTGGAGGTGTCCATGCTAATCATAGCATACCTTTCCTTCAGCTCCATAATATTCCATCAATTTCTGGCCTTTACGTTTTCAGCTTTGGAGGACATATTGTTTTCCCTGATTTATATAAAGCCATGAAAGACCCCTCAAAGTTTACCAAGGTCTCTATTGTAAGCTTCACAATTGTTACAGCACTTTATACAACAGTTGGGTTCATGGGTGCAAAAATGTTTGGGAATGGTGTCAACTCTCAGATCACTCTCAGCATGCCACCAAAGCAAATCATAACAAAGATTGCTCTTTGGGCTACCGTGCTCACTCCCATGACCAAATACGCTCTTGAATTTACACCATTTGCAATTCAGCTGGAGCATAGGCTTCCAAAATCCATGAGTAGATGGACAAAAATGATAATTAGGGGATCTGCGGGTTCATTCTTGCTTTTGTTCATTCTCACGATTGCTCTGTCAGTGCCATATTTTGAGCATGTACTCAGCCTCACTGGTTCCCTTGTTAGTGCAGCAATCTGTTTGATTATGCCATGTGTTTTCTACCTGAAGATATGTTGGGGGAAAATAGCAAAGCCTCTATTAGTCCTAAACTTGTTCCTCATCACAATCGGGTTTGTTCTTGGGGTGATGGGTACTATTTCCTCCTCAATGTCAATATTGGACAGTTTTCGGTCACAACACTCAAGTTGA 1455 0.4275 MWGKMLKSLRKSLSLQSNCIKHKGQVDGTVSVHGENLAVLPVQWANCNICLEESKHCNCDHINAEDTKSTAAEGANVNNTEHDAEANSSFVHAVINMVGMLIGLGQLSTPYAVEKGGWASSFMLIGLGLMCTYTSIVLGKCLEKNPKSRSYVDIGAHAFGSKGRLLVSTFIYMEIFMALVSYTISLHDNLITVFLGTHMKLHFAKLSTSQLLTIVAILIALPSLWIRDLSKISFLSTVGILMSLVIFVSVAATAVFGGVHANHSIPFLQLHNIPSISGLYVFSFGGHIVFPDLYKAMKDPSKFTKVSIVSFTIVTALYTTVGFMGAKMFGNGVNSQITLSMPPKQIITKIALWATVLTPMTKYALEFTPFAIQLEHRLPKSMSRWTKMIIRGSAGSFLLLFILTIALSVPYFEHVLSLTGSLVSAAICLIMPCVFYLKICWGKIAKPLLVLNLFLITIGFVLGVMGTISSSMSILDSFRSQHSS* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0649 484 PANTHER OS05G0424000 PROTEIN-RELATED 30 479 - -
Dod04g0649 484 Pfam Transmembrane amino acid transporter protein 87 469 IPR013057 -
Dod04g0649 484 PANTHER AMINO ACID TRANSPORTER AVT1H 30 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0649 Dod-Chr4 9592077 9595714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0649 47 482 Amino Acid or Auxin Permease AAAP Family AT5G16740 59.453 1.46e-169 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0649 - - lang:109342470 701.434