Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0643 ATGAACGACGCAGATGTGTCCAAGCAAATCCAGCAGATGGTCAAGTTCATCCACCAGGAAGCCGAGGAAAAAGCCAATGAGATCTCTGTCTCCGCCGAAGAAGAATTCAACATCGAGAAACTGCAGTTGGTCGAAGCAGAAAAGAAGAAGATCAGGCAAGAGTACGAGCGAAAACAGAAGCAAGTTGAAGTTCGCAAGAAGATTGAGTACTCAATGCAGCTGAATGCTTCTCGGATAAAAGTTCTTCAAGCTCAAGACGATGTGGTTGGTTCCATGAAAGAAGCTGCGTCGAAGGAACTTTTGAATGTGAGCCATCATCATCATTTGAATGTGATCCATCATGCATACAGAGACCTTCTGAAAGAACTCATTGTTCAGAGTCTGCTAAGATTGAAAGAACCTTCTGTCTTATTGAGATGTCGGAAACATGATGTGCACTTGGTAGAGCATGTGCTGGATTCAGCTGCCCAGGAATATGCTGACAAAGCAAATGTTCATCCACCAGAGATCATTGTTGATCACAATGTCTATCTTCCACCTGCACCCAGCCATCACAATGTCCATGAACCTTACTGCTCTGGAGGGGTGGTATTGGCTTCTCGAGATGGAAAGATTCTGTGTGAAAATACCCTTGATGCACGACTGGATGTGGTGTTCCGCAAAAAGCTTCCTGAGATCCGAAAGAAGCTCTTCGGACAAGTTGCTGCTTGA 711 0.4501 MNDADVSKQIQQMVKFIHQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKQKQVEVRKKIEYSMQLNASRIKVLQAQDDVVGSMKEAASKELLNVSHHHHLNVIHHAYRDLLKELIVQSLLRLKEPSVLLRCRKHDVHLVEHVLDSAAQEYADKANVHPPEIIVDHNVYLPPAPSHHNVHEPYCSGGVVLASRDGKILCENTLDARLDVVFRKKLPEIRKKLFGQVAA* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0643 236 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 236 IPR002842 GO:0033178|GO:0046961|GO:1902600
Dod04g0643 236 Hamap V-type proton ATPase subunit E [atpE]. 8 232 IPR002842 GO:0033178|GO:0046961|GO:1902600
Dod04g0643 236 Coils Coil 38 61 - -
Dod04g0643 236 Pfam ATP synthase (E/31 kDa) subunit 16 231 IPR002842 GO:0033178|GO:0046961|GO:1902600
Dod04g0643 236 Gene3D - 1 62 - -
Dod04g0643 236 Gene3D - 91 235 IPR038495 -
Dod04g0643 236 PANTHER ARCHAEAL/VACUOLAR-TYPE H+-ATPASE SUBUNIT E 1 236 - -
Dod04g0643 236 SUPERFAMILY V-type ATPase subunit E-like 87 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0643 Dod-Chr4 9426607 9436526 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0643 1 236 Primary Pumps ATPases(2) AT4G11150 73.305 2.01e-123 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0643 K02150 - gmx:100500452 394.815