Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0638 ATGACTATGCCCCCTGTTTTCGAGTACAATATCAGTGATCTGTATGAGGAAGCAAAGAGGAGATGGCTGAAGCCTATAGAAGTGCTGTACATTTTACAGAATCATGAGAAGTGCAAGTTCACCAATTTGCCCCCCCAGCAGCCCGAAAGCGGATCCCTGTTTCTATTTAATAGAAGAATCATGCGTTTCTTCCGTAAGGACGGTCATAATTGGCGGAAGAAAAAGGATGGAAGATCTGTGGGAGAAGCACATGAACGGCTTAAGGTTGGTAATGTTGAAATCTTAAATTGTTACTATGCACATGGAGAGGAGAAGCGTACTTTCCAGAGGAGGAGCTATTGGATGCTGGATCCGAAATATGAGCATATTGTTCTCGTGCATTACAGAGAAACAAGTGAGGGGACATCCAGTTCTGGACCTGTCACACAATCATCTCCAGGTTCTATGTTTAGTCAGAGTGGAAGCTCATATACTACTCAGAGTCCAGGGACCGCATCTGTTCTTGGTGATTCATGTGAACCAAATCAGAATTTCTCCAGTCGTGGCTCTGTAGAAGTTACCTCTGATGTATTCATCAGAAACAATGGAACTGATCATGCGGATGGAACAGATGCACAAGCATTGCACCAAATAAAGGAACAGTTAAGTTTGAATGAGGATAGCCTTGATGAAATTGCACATTATTTAAACCCTCAACATGATCAAAGAGTGATTTGCAAACAAGATAATTCTGCTGCCTTCACTGCACCAGATGAGTGTGGACAACCTTATGATGAATACAATGGAACACAAGATGGCGGGGGTAAATATTATAGTGGACTCTTCAACCATGATTGCCCTGAAGGAAATGAAAAAGCTTTATCTTGGACGGAGTTGCTGGAATCATGTAAGCCCTCATCTGTGACCAAGTTACCAGAGCAACATGCACATGGGGCATCTGGAAATGACGGGTCACTATACTCTTCAGGAAGGGTACTGATTGCCAATCAGGAAAACAGTCACTGGTTAAACTCGAACAGTAATAATGCTGAAAACCCTGTCTTCTCATGTCCTCAAGATGTCGATGGAGACAAATTTCCTCCATATTCAACTAGTTCTGACTACCATACAATGTTGTTTGAGCAAATGCAAATGCAAGAACCTCTGGGTGCAGGTTCAAGCTTGACTGTTTCACAGAAACAGAAATTCACGATTAAGGCAGTCTCCCCAGAATGGTGTTATTCGACTGAGACTACACAGGTCATCATTATTGGGACATTTCTCTGTCTTCCCTCGGATTCTACCTGGGCTTGTATGTTCGGTGATATTGAAGTTCCTGCTGAGATAGTTCAGGATGGTGTAATCTGTTGTGAAGCTCCAGCCCACCTTCCTGGGAAGGTTACTCCTGTGCATTACTTCAGGAAATCGAGAGTCCTGCAGTGA 1422 0.4332 MTMPPVFEYNISDLYEEAKRRWLKPIEVLYILQNHEKCKFTNLPPQQPESGSLFLFNRRIMRFFRKDGHNWRKKKDGRSVGEAHERLKVGNVEILNCYYAHGEEKRTFQRRSYWMLDPKYEHIVLVHYRETSEGTSSSGPVTQSSPGSMFSQSGSSYTTQSPGTASVLGDSCEPNQNFSSRGSVEVTSDVFIRNNGTDHADGTDAQALHQIKEQLSLNEDSLDEIAHYLNPQHDQRVICKQDNSAAFTAPDECGQPYDEYNGTQDGGGKYYSGLFNHDCPEGNEKALSWTELLESCKPSSVTKLPEQHAHGASGNDGSLYSSGRVLIANQENSHWLNSNSNNAENPVFSCPQDVDGDKFPPYSTSSDYHTMLFEQMQMQEPLGAGSSLTVSQKQKFTIKAVSPEWCYSTETTQVIIIGTFLCLPSDSTWACMFGDIEVPAEIVQDGVICCEAPAHLPGKVTPVHYFRKSRVLQ* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0638 473 SMART CG_1_2 14 132 IPR005559 GO:0003677
Dod04g0638 473 PANTHER CALMODULIN-BINDING PROTEIN 3 461 - -
Dod04g0638 473 MobiDBLite consensus disorder prediction 131 181 - -
Dod04g0638 473 Pfam CG-1 domain 17 130 IPR005559 GO:0003677
Dod04g0638 473 Pfam IPT/TIG domain 397 461 IPR002909 -
Dod04g0638 473 ProSiteProfiles CG-1 DNA-binding domain profile. 11 137 IPR005559 GO:0003677
Dod04g0638 473 SUPERFAMILY E set domains 397 461 IPR014756 -
Dod04g0638 473 Gene3D Immunoglobulins 390 465 IPR013783 -
Dod04g0638 473 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 3 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0638 Dod-Chr4 9390220 9396442 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0638 6 460 CAMTA Transcription Factor Family AT1G67310 40.909 4.90e-105 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0638 K21596 - gmx:100791430 634.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0638 04 9390220 9396442 Dod04g0638 04 9390220 9396442 ECH
Dod04g0638 04 9390220 9396442 Dod04g2038 04 43878139 43888143 PCT