Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0637 ATGCTTCTTTCCGCTCCAACTAAAAAGAATGGCAACATAGAATCTGTAAGTCACCATCCAGAAAATCAAAAAGCTGATGATGATTCATGGAGCCATATTATAGAGGCTCTTCTTGATGGCAGCGGAACTTCATCAGGTACTACTGATTGGATCCTTGAAGAGCTTCTGAAGGATAAGCTGCAGCAGTGGCTTTCCCACAAATCCCAAGAAAGAGATGAAGGGACAGGCTGTTCTTTGTCCAAGAAAGAGCAGGGGATTATACACATGGTTGCTGGGTTGGGTTTTGAGTGGGCTTTGAACCCTATTCTCAGTTGTGGTGTGAATGTAAATTTCCGTGACATCAATGGGTGGACTGCCCTTCATTGGGCTGCACGGTTTGGAAGGGAGAAAATGGTTGCTTCACTTATAGCTTCTGGTGCATCTGCTGGAGCAGTGACTGATCCAAGTTCACAAGATCCAGTTGGTAAAACGGCTGCATCTATTGGTGCCAGCAATGGCCATAAAGGACTGGCTGGTTATCTTTCAGAGGTAGATCTCACAAGCCATCTTTCATCCCTCACACTGGAAGAGAGTGAGATTTCTAAAGGTTCTGCTGAGCTTCAAGCAGAGTTCACTGTTAGTTGTGTCTCTACGGAAAATATTGGAGCTGGTGATGATCAGGTTTCACTGAAACATACCTTGGCTGCTGTCAAAAATGCTGCTCTGGCAGCTGCACGTATACAGGCTGCTTTTCGTGCTCATTCTTTCAGAAAACGGACGGAGAGAGCAGCTGCTGCTGCTGCTGCTCATCTAGATGGATATGGAATCGGTGCTGATAGCATTGATAACATTCCTGAGCTTTCTGCTATGTCAAAACGTAGCTTTGGGAGGTCACGGGATTACAATTCAGCTGCCTTATCAATTCAGAAGAATTATCGTGGTTGGAAAGGTCGCAAAGATTTCTTAGCATTGCGCAAAAAAGTAGTGAAGATTCAGGCTCATGTGAGGGGTTACCAGGTTCGGAAGCATTACAAGTTGATAGTATGGGCAGTTGGAGTCTGGGAGAAGGTAGTGCTACGATGGCGGAGAAAAGGAGCTGGTTTACGAGGTTTTCGACAAGAGTTGGAGTCAACTGATGAAAGCGACGATGAAGATTTTCTCAGGGTGTTCCGTAAGCAGAAAGTAGATGTGGCAATCGAGAAGGCTTTTTCACGGGTATTATCCATGGTCCATTCTTCAGGTGCTCGACGGCAATATCTCCGCATGCTGGAGATGTATCGCAAGGCTAAGGCTGAACTTGGTAGCACAGTGGAAGAAGCACCATCAACTTCTGGAGGGGATGCTTCCAATACAGAAGATGATGAATTCTTCCAAATTCCCTGGGAATGGGAGATGATACTCTAG 1383 0.4577 MLLSAPTKKNGNIESVSHHPENQKADDDSWSHIIEALLDGSGTSSGTTDWILEELLKDKLQQWLSHKSQERDEGTGCSLSKKEQGIIHMVAGLGFEWALNPILSCGVNVNFRDINGWTALHWAARFGREKMVASLIASGASAGAVTDPSSQDPVGKTAASIGASNGHKGLAGYLSEVDLTSHLSSLTLEESEISKGSAELQAEFTVSCVSTENIGAGDDQVSLKHTLAAVKNAALAAARIQAAFRAHSFRKRTERAAAAAAAHLDGYGIGADSIDNIPELSAMSKRSFGRSRDYNSAALSIQKNYRGWKGRKDFLALRKKVVKIQAHVRGYQVRKHYKLIVWAVGVWEKVVLRWRRKGAGLRGFRQELESTDESDDEDFLRVFRKQKVDVAIEKAFSRVLSMVHSSGARRQYLRMLEMYRKAKAELGSTVEEAPSTSGGDASNTEDDEFFQIPWEWEMIL* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0637 460 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 290 345 IPR027417 -
Dod04g0637 460 SMART ANK_2a 115 144 IPR002110 GO:0005515
Dod04g0637 460 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 1 438 - -
Dod04g0637 460 ProSiteProfiles IQ motif profile. 317 341 IPR000048 GO:0005515
Dod04g0637 460 ProSiteProfiles IQ motif profile. 294 323 IPR000048 GO:0005515
Dod04g0637 460 SUPERFAMILY Ankyrin repeat 85 176 IPR036770 -
Dod04g0637 460 ProSiteProfiles Ankyrin repeat region circular profile. 115 141 - -
Dod04g0637 460 ProSiteProfiles Ankyrin repeat profile. 115 147 IPR002110 GO:0005515
Dod04g0637 460 ProSiteProfiles IQ motif profile. 236 262 IPR000048 GO:0005515
Dod04g0637 460 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 4 1 438 - -
Dod04g0637 460 MobiDBLite consensus disorder prediction 1 26 - -
Dod04g0637 460 Gene3D - 294 341 - -
Dod04g0637 460 Pfam Ankyrin repeats (3 copies) 97 175 IPR002110 GO:0005515
Dod04g0637 460 Gene3D - 14 180 IPR036770 -
Dod04g0637 460 Pfam IQ calmodulin-binding motif 236 252 IPR000048 GO:0005515
Dod04g0637 460 Pfam IQ calmodulin-binding motif 318 338 IPR000048 GO:0005515
Dod04g0637 460 Pfam IQ calmodulin-binding motif 296 314 IPR000048 GO:0005515
Dod04g0637 460 SMART iq_5 316 338 IPR000048 GO:0005515
Dod04g0637 460 SMART iq_5 293 315 IPR000048 GO:0005515
Dod04g0637 460 SMART iq_5 232 254 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0637 Dod-Chr4 9387341 9390104 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0637 24 453 CAMTA Transcription Factor Family AT1G67310 66.435 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0637 K21596 - gmx:100786880 600.512