Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0603 ATGGGGGTTAATGGATTTGTTGAGTCACTTCTGCAGTTTCTCCAATCAGCTGTGCATGAAGGGAAAGTGATCGATCAAGAAAATGGAGCTATGGCACTGTTCAACCTGGCTGTGAATAATGACGGAAATAAGGAAATTATGTTATCAGCGGGAATCTTATCATTGTTGGAGGAAATGACTTCTAACCCTAGTTGTTATGGCTGTGCAACTGCTCTCTATCTTAACCTCTCTTGCCTTGAAGAAGCCAAGCCTGTGATTGGTCTGAGTCAAGCTGTCCAGTTCCTAATCCAGGTTCTTCAATCCAACACTGATGTCCAATGCAAGCTAGATTCTCTCCATGCACTCTATAATCTTTCTACCGTGCCCTCCAACATTCCAAACCTCCTTTCATCCGGAATCATGAATGGCCTGCAATCCCTTCTTGTAGGCCAGGGTGATTCCACGTGGACAGAAAAATGCTTAGCTGTATTGATAAATCTGGCTGTTTCTCAATTGGGAAGACAGGAAATGATGTCATCTCCTGGACTCATAAGCACTTTGGCTTCGATACTGGACACCGGTGAGCTGCTAGAGCAAGAACAAGCCGTCTCTTGTCTCCTAATTCTGTGTAACAGGAGTGAAAATTGTAGCCAGATGGTCCTACAAGAAGGGGTTATACCCGCATTGGTGTCGATATCAGTGAATGGGACGTCGAGAGCTAAAGAAAAAGCGCAGAAACTGTTGATGCTCTTCCGAGAGCAGCGACAGCGAGACCATTCTCCCTACTGA 768 0.4531 MGVNGFVESLLQFLQSAVHEGKVIDQENGAMALFNLAVNNDGNKEIMLSAGILSLLEEMTSNPSCYGCATALYLNLSCLEEAKPVIGLSQAVQFLIQVLQSNTDVQCKLDSLHALYNLSTVPSNIPNLLSSGIMNGLQSLLVGQGDSTWTEKCLAVLINLAVSQLGRQEMMSSPGLISTLASILDTGELLEQEQAVSCLLILCNRSENCSQMVLQEGVIPALVSISVNGTSRAKEKAQKLLMLFREQRQRDHSPY* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0603 255 Gene3D - 1 253 IPR011989 -
Dod04g0603 255 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 5 51 IPR000225 GO:0005515
Dod04g0603 255 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 1 254 - -
Dod04g0603 255 SUPERFAMILY ARM repeat 8 243 IPR016024 -
Dod04g0603 255 PANTHER U BOX DOMAIN-CONTAINING 1 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0603 Dod-Chr4 8675801 8677276 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0603 1 252 U-box Gene Family AT1G24330 65.079 2.89e-109 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0603 - - gmx:100814944 399.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0603 04 8675801 8677276 Dod04g0603 04 8675801 8677276 ECH
Dod04g0603 04 8675801 8677276 Dod04g2018 04 43602012 43609551 PCT