Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0601 ATGCCGGAATCAGGAAAATCGCTCGGTAACAACCTTCCAATAATTCGCATACCAGGGGACGGTAGATGCCTGTTTAGATCGGTGGTATATGGTGCATGCCTTAGAAAAGGGCAGCCATCTCCAAGTCTCAACAGGCAGAAAGAACTGGCAGATGAGCTTAGAGCAAAAGTTGTGGATGAATTCATCAAGAGGAGGGCAGACACAGAATGGTTTCTTGAGGGCGACTTTGAAACCTATACAGTACGGATGCGAAAGCCTCACATTTGGGGAGGAGAGCCTGAACTTCTCATGTCCTCACACGTTTTACAGATGCCTATAACAGTGGTCATGGAGGATAAGAAGTCCAGCAGCCTTAAAGTTATAGCTGAATACGGTCAGGAGTATGGTAAGGATAACCCAATTCGAGTCATCTATGATGGCTATGGCCACTATGATGCATTGAAGACTTCAGATTGA 456 0.4583 MPESGKSLGNNLPIIRIPGDGRCLFRSVVYGACLRKGQPSPSLNRQKELADELRAKVVDEFIKRRADTEWFLEGDFETYTVRMRKPHIWGGEPELLMSSHVLQMPITVVMEDKKSSSLKVIAEYGQEYGKDNPIRVIYDGYGHYDALKTSD* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0601 151 Gene3D - 4 151 - -
Dod04g0601 151 Pfam OTU-like cysteine protease 18 140 IPR003323 -
Dod04g0601 151 PANTHER OS09G0487700 PROTEIN 4 149 - -
Dod04g0601 151 PANTHER OTU DOMAIN CONTAINING PROTEIN 4 149 - -
Dod04g0601 151 SUPERFAMILY Cysteine proteinases 11 148 IPR038765 -
Dod04g0601 151 ProSiteProfiles OTU domain profile. 12 150 IPR003323 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0601 Dod-Chr4 8663595 8672087 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0601 17 150 C2H2 Transcription Factor Family AT1G50670 29.630 7.01e-07 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0601 K18342 - gmx:100792132 281.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0601 04 8663595 8672087 Dod04g0601 04 8663595 8672087 ECH