Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0585 ATGCTTGGCTCTCTCTTCATATTTCCACAGAAGGCATTGACTGCATTATTCTGCAGGAGCTCTATTTGTTTATTCTTAACCATGGCCGTTTTGGATTCTGTTTTGGGAGTGGTCAATATGGGATTCTTCTATGCGATGTTGGTATGGCTTCTTGTTGACACTTTGAGAGAAAGCAAAAGATGTAACCATGTTCTCCATTCAAGACAAGGAAGGACACGATGTTATGCTGTTTTTGCCACGACCGCTAGTGCTCTCCCCAATGCTGTTATCTCAGTTTTGAACATAGCTTTTGCCTTTCATGAACACAGCAGCACTAGAAGAATCATAGGATATAACACTCTTTCTTTGGCCTTGACTTGGGTTTTAGCAACCATAGTTTCATTATATTCAATGAAAAGAATGCTGAAGGAGAACAAAAAGTACTGGCCCCTTGTGCTAATTCTCTGGTGGGTCTTTGCTACTGTCTTAGATGGGGTCTCAGTGTGCGTGAAGCTGACAAGAAACACCAAATCCATGAAGTTATGGTTTAAGGAAAACATAATTGATGTGGTTTCTTTTCCTTTGTTGTTACTTCTCTGCTTCAATATAATTGCTATGCCAATGTGGACATGGAGACTCAATAATGTGGAAGAAGAGTTCTTGCTTCACAAGGAGTTGCCAGTGCAACCCTCTTTGGAAAATGATGATGAAGGGACCTTCACAAAAGCAAGCATGTGGAGTCACCTCATGTTCATGTGGCTGAACCCCATTTTCAAGAGGGGCCGAATTCAAAAGCTTGAGCTCCCTCATATCCCTCATGTTCCTCATTCCGAAACAGCACAGAGTGCTTCCTCCTTGTTGGAAGAATCGCTTCTCAAACAAAAACTGGAAGAGGTTTCTTTGACGAAAGCTATTGCCCACTTTATCTGGGAAACCTTGGCCTTCAATGCAGTTTTTGCAGGAGTTAACACGATTGCCTCTTATACGGGTCCCTTGTTGATCACAAATTTTGTGAATTTCTTGCTGGACAATGATGATAATTCAAGCAACCGATATGGATTGATTCTTGCATTCATTTTCTTCCTCTTAAAGACGGTGGAGTCACTGACTCAAAGACAATGGTACTTCGGTGCTCAGAGAATTGGAATCCGGGTGCGTGCAGCACTTATGGTGCTGATTTATAAGAAGTCCTTATCAATTAAGCATGCCGGAACTTCACATGGCAAAATCATAAACATGATCAATGTTGATGCTGAAAGAATTGGGGACTTCTGCTGGTACATTCATGGCGTTTGGTTACTTCCAATTCAAGTCATTCTGGCCATGTTTATCTTGTATGTGAACTTAGGCTTCACCCCTTCAATTGCTGCACTTGCTGTCACTGTTTTGGTCATTTTGGGCAACACTCCTTTGGCCAAATTGCAAAAGAGCCTCCACTCCAAGATCATGGAGGCTAAGGATTCAAGAATCAAGGCGACTTCAGAGACCATGAAGAATATCAGAATCTTGAAAATGCATTCATGGGAGTCCACTTTCTTGAAGAAGGTTCTCCACCTAAGGAATACTGAGAGGAGGTGGCTGCAGAAGTACCTTTGCACTTGCTCAGCAGTGGCAACTCTATTTTGGACATCTCCAACTCTTATTTCTGCTGTTACTTTTGGTGCATGTATACTGGTGAAAACAGAATTAACAGCAGCAAAAGTCCTCTCAGCTTTAGCAACTTTTCGTATTTCACAAGAACCGATTTACAACCTACCTGAGCTTATTTCCATGATGGCTCAAACCAAAGTATCAGTTGATAGAATCCTAAAGTTTATTCATGAAGAGGATAGAACACCATTGGCAAATAGTCATGCTTTTGAAGCTTCTGATATTGCTATTGAAGTTAAAGCAAGTGAATATGCATGGGAAGCGGATCAAAACTACAAGAAACCAACAATTCAAATTACAGAAACTTTGAAGATAAAGAAAGGGCAAAAGGTTGCAATTTGTGGATCAGTAGGGTCTGGAAAATCAAGCTTTCTCTGCTGTATGCTTGGTGAGATACCAAGGGTGTCTGGGGAAGGGATCAATATCAAGGGGAGCAGAAGTTTTGTGCCACAAAGTCCCTGGATTCAGTCTGAGACTGTAAGGGAAAACATATTGTTTGGGAAGGAAATGAATAAGGACTTGTATGAAAAAGTTTTGGAGGGCTGTGCTTTGCATCAGGATATTAGCTCGTGGGCTGATGGAGATTTGACCATGGTGGGGGAAAGAGGCATAAAGTTAAGCGGAGGGCAAAAACAGAGGATTCAACTGGCAAGGGCTGCTTATAATAATTCAGATATTTATTTTCTGGATGACCCTTTCAGTGCTGTTGATGCACATACAGGAACACATTTGTTCAAGAAATGCCTTATGCTACTTTTAGATGAGAGAACAGTTGTTTATGCTACTCATCAACTTGAATTCTTGGAAGCTGCTGATTTTATTGCAGTGATAAAAGATGGAAAAATTGTGGAATATGGAAAGTATAACGATTTGATAGAATGTCCCAATAGTGAACTTGTTAAACAGATGGCTGCTCATAAGGAAACAGTGACGAAAATAAATCCATGCAAAGAGGATGATACTGTGAGCTGTAGATCACACCAAACAAATCATATTGAAGTTGCTGATAAAAATCTTCAAGATACCACCAAAGATTGCAAGCTTTTGGAGAAAACCGATGAGGAGGAAGCTCAGACTGGTCGTGTGAAATGGGGTGTTTACTCCACTTTTGTTACATCTGCTTATAGAGGCGTGCTTGTTCCTGTTGTTCTTCTCTGCCAAATATTCTTTCAGGGACTGCAGATGGGAAGCAGTTATTGGATTGCTTGGGCCACAGAGCAACAGGGCAGGGTCAGCAATGGACAGCTTACAGGAACATTTGTTCTACTGTCTGGTGGAAGCTCCATCTTCATGCTTGGAAGGACCATTGTAATGGCTAAAATTGCCATGGAGACTGCTCAGCACCTCTTTCATGGGATGATCACTTCACTTTTCAGGGCTCCTATTTCATTCTTCGACACCACCCCTTCAAGCAGAATCCTGAGTAGGTCTTCTACGGATCAAAGTACAGTGGACACAGACATACCCTACAGATTAGCTGGGCTTATATTTGCACTAATCCAGTTAGTGAGTATCATTATCCTAATGTCCCTAGTTGCATGGCAAGTCACTCTCCTGTTTCTTGTGGTGCTTGCTCTCTCCATCTGGTATCAGGCTTATTACATTACTAGTGCTAGGGAATTAGCCAGGATGGTAGGGATTAGAAAGGCTCCAATCTTGCATCACTTCTCTGAGTCAGTTGCTGGGGCTGCCACAATTCGCTGTTTCAATCAAGAGCAAAGATTCTTGACAAAAGTTATGACTCTAATTGATGATTATTCTCGGGTAGCCTTTCACAATTATGCCACCATGGAGTGGTTGTCTATCCGAGTCAATTTTCTCTTTAATTTGGTTTTCTATTTTGTTCTCACCATCTTGGTTACTCTGCCAAGGTCTTCCATTGATCCTAGCCTGGCAGGATTGGTAGCTACTTATGGTTTGAGCCTGAATGTACTGCAGGCTTGGGTGATATGGAATCTTTGCAATGTTGAGAACAAAATGATATCAGTTGAGAGAATATTGCAGTTCACTAGCATACCAAGTGAAGCGCCCTTAATAATTCAAGACTGTAGGCCTGAGCCTGAGTGGCCTAGGGAGGGAAAGGTTGAACTTCATAACCTTCATATACAGTATGATCCTTCTGCTCCTATGGTTCTCAAAGGTGTCAGTTGCACCTTCCCAGGACAAAAGAAAATTGGAGTTGTAGGCAGGACAGGAAGTGGAAAATCCACTTTAGTTCAGGCTCTCTTTCGTGTAGTTGATCCTTCAGAAGGATGGATACTGATTGATGGTGTAAATATCCGCAATATTGGTCTGCAGGATTTGAGATCTAAGCTTGGTATAATTCCTCAAGATCCAACCTTGTTTCAAGGCACTATGAGGACTAACTTGGATCCTCTAGACCAACATTCAGATCAAGAACTTTGGGAGGTTCTGGATAAATGCCATCTTGCTCAAATTGTAAGGAATGATGTAAGGCTTCTTGATGCACCAGTCGCTGAGAATGGAGAAAACTGGAGTGTTGGACAAAGGCAGCTTGTTTGCCTCGCTAGGCTTCTGTTGAAGAAAAGAAAAGTTCTGGTCTTAGATGAGGCAACTGCATCCGTTGATACAACTACTGATAACCTACTTCAAAAGACAATTAGGAAAGAGACAAGTGGATGCACAGTCATTACCGTGGCACATAGAATCCCTACCGTCATTGATAATGACTTGGTTTTGGTCCTTGATGAAGGGAAGATTGTAGAGTATGATCACCCAGCTCAGTTGCTACAGAATAGTTCTTCCTCATTCTCAAAGTTGGTGTCAGAATTTTTGACGAGGTCTTCCCAAAGTAACTGCCAAGAATGA 4458 0.4177 MLGSLFIFPQKALTALFCRSSICLFLTMAVLDSVLGVVNMGFFYAMLVWLLVDTLRESKRCNHVLHSRQGRTRCYAVFATTASALPNAVISVLNIAFAFHEHSSTRRIIGYNTLSLALTWVLATIVSLYSMKRMLKENKKYWPLVLILWWVFATVLDGVSVCVKLTRNTKSMKLWFKENIIDVVSFPLLLLLCFNIIAMPMWTWRLNNVEEEFLLHKELPVQPSLENDDEGTFTKASMWSHLMFMWLNPIFKRGRIQKLELPHIPHVPHSETAQSASSLLEESLLKQKLEEVSLTKAIAHFIWETLAFNAVFAGVNTIASYTGPLLITNFVNFLLDNDDNSSNRYGLILAFIFFLLKTVESLTQRQWYFGAQRIGIRVRAALMVLIYKKSLSIKHAGTSHGKIINMINVDAERIGDFCWYIHGVWLLPIQVILAMFILYVNLGFTPSIAALAVTVLVILGNTPLAKLQKSLHSKIMEAKDSRIKATSETMKNIRILKMHSWESTFLKKVLHLRNTERRWLQKYLCTCSAVATLFWTSPTLISAVTFGACILVKTELTAAKVLSALATFRISQEPIYNLPELISMMAQTKVSVDRILKFIHEEDRTPLANSHAFEASDIAIEVKASEYAWEADQNYKKPTIQITETLKIKKGQKVAICGSVGSGKSSFLCCMLGEIPRVSGEGINIKGSRSFVPQSPWIQSETVRENILFGKEMNKDLYEKVLEGCALHQDISSWADGDLTMVGERGIKLSGGQKQRIQLARAAYNNSDIYFLDDPFSAVDAHTGTHLFKKCLMLLLDERTVVYATHQLEFLEAADFIAVIKDGKIVEYGKYNDLIECPNSELVKQMAAHKETVTKINPCKEDDTVSCRSHQTNHIEVADKNLQDTTKDCKLLEKTDEEEAQTGRVKWGVYSTFVTSAYRGVLVPVVLLCQIFFQGLQMGSSYWIAWATEQQGRVSNGQLTGTFVLLSGGSSIFMLGRTIVMAKIAMETAQHLFHGMITSLFRAPISFFDTTPSSRILSRSSTDQSTVDTDIPYRLAGLIFALIQLVSIIILMSLVAWQVTLLFLVVLALSIWYQAYYITSARELARMVGIRKAPILHHFSESVAGAATIRCFNQEQRFLTKVMTLIDDYSRVAFHNYATMEWLSIRVNFLFNLVFYFVLTILVTLPRSSIDPSLAGLVATYGLSLNVLQAWVIWNLCNVENKMISVERILQFTSIPSEAPLIIQDCRPEPEWPREGKVELHNLHIQYDPSAPMVLKGVSCTFPGQKKIGVVGRTGSGKSTLVQALFRVVDPSEGWILIDGVNIRNIGLQDLRSKLGIIPQDPTLFQGTMRTNLDPLDQHSDQELWEVLDKCHLAQIVRNDVRLLDAPVAENGENWSVGQRQLVCLARLLLKKRKVLVLDEATASVDTTTDNLLQKTIRKETSGCTVITVAHRIPTVIDNDLVLVLDEGKIVEYDHPAQLLQNSSSSFSKLVSEFLTRSSQSNCQE* 1486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0585 1485 SUPERFAMILY ABC transporter transmembrane region 137 602 IPR036640 GO:0005524|GO:0016021
Dod04g0585 1485 CDD ABCC_MRP_domain1 620 824 - -
Dod04g0585 1485 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 143 1481 - -
Dod04g0585 1485 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 925 1201 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod04g0585 1485 SUPERFAMILY ABC transporter transmembrane region 924 1218 IPR036640 GO:0005524|GO:0016021
Dod04g0585 1485 SMART AAA_5 1264 1455 IPR003593 -
Dod04g0585 1485 SMART AAA_5 650 824 IPR003593 -
Dod04g0585 1485 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 310 587 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod04g0585 1485 CDD ABC_6TM_ABCC_D1 308 595 IPR044746 GO:0140359
Dod04g0585 1485 Pfam ABC transporter 1255 1403 IPR003439 GO:0005524
Dod04g0585 1485 Gene3D - 1221 1474 IPR027417 -
Dod04g0585 1485 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 622 847 IPR003439 GO:0005524
Dod04g0585 1485 ProSitePatterns ABC transporters family signature. 749 763 IPR017871 GO:0005524
Dod04g0585 1485 Coils Coil 875 895 - -
Dod04g0585 1485 CDD ABC_6TM_ABCC_D2 923 1213 IPR044726 GO:0140359
Dod04g0585 1485 PANTHER OS01G0902100 PROTEIN 143 1481 - -
Dod04g0585 1485 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1230 1464 IPR027417 -
Dod04g0585 1485 Gene3D ABC transporter type 1, transmembrane domain 887 1219 IPR036640 GO:0005524|GO:0016021
Dod04g0585 1485 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 644 837 IPR027417 -
Dod04g0585 1485 Pfam ABC transporter 645 776 IPR003439 GO:0005524
Dod04g0585 1485 Gene3D - 603 869 IPR027417 -
Dod04g0585 1485 Gene3D ABC transporter type 1, transmembrane domain 272 602 IPR036640 GO:0005524|GO:0016021
Dod04g0585 1485 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1238 1472 IPR003439 GO:0005524
Dod04g0585 1485 Pfam ABC transporter transmembrane region 942 1166 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod04g0585 1485 Pfam ABC transporter transmembrane region 309 568 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod04g0585 1485 CDD ABCC_MRP_domain2 1236 1456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0585 Dod-Chr4 8401939 8410601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0585 601 864 Calmodulin-binding Proteins AT2G36910 30.241 5.97e-25 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0585 - - gmx:100809063 2085.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0585 04 8401939 8410601 Dod04g0585 04 8401939 8410601 ECH