Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0562 ATGGCTTCCGCAGCCCCTCAAAGGGTACCCCTCGAGAAGGTTCAAGGAGCCGTGGAAGCCCTCCTAAAATGGCGCGACTCCAACTCCCAATCCCAAAAGCCCAAGCTCTTCGACCAAGACGAGGAGTTCGTGTACCTCGTCCTCACCCTCAAGAAGATCCCCCCAAAGGGCCGCACTAACCCCTATAAGGTCCCCTTGCCCCACGCCCTCGCCTCCCCCTTCTCCGAAACCTGCCTCATCATCGACGATAGGCCAAACTCCAACCTCACCAAGGACGACGCCCAGAAGAAGATCAAGGCCGAAAACGTCGCCGTTTCGAAGGTCCTCAAGCTATCGAAGCTCGCTTCCGATTACCGCCCCTTCGAGGCCAAGCGCAAGCTCTGCGACTCCTACGACATGTTCTTCGTCGACAGGGGGGTTGCCACGCTTCTTCCGAGGTTGTTGGGGAAGAAATTCTTCAAGAAGAAGAAGGTTCCCGTGCAGGTGGATTTGAGGAAGAGGAACTGGAAGGAGCAGGTGGAGAGGGCGTGCTCCTCCGCGCTGTTTTTCGTTGGTACGGGCACTTGTAGTGTTGTGAAGGTTGCCAGGGTGTCTATGGAGAGGGATGAGATTGTTGACAATGTGGTCGCGGCGATTGATGGGGTTATCGATGTTGTGCCGAAGAAGTGGGGGAATGTGAGGTCGTTACATGTGAAGCTGTTGGAGTCGTTGGCGCTGCCGGTTTATCAGGCAGTTCCGGATGTGAGGTTGAGGATTGAGGGAGGTAAGGGTGAGAAGGAGAATGTTGTGGTGGAGGAGAAGGAGAAGGAGGAGGAAGAGGTTAGTGGCGCGAGTGCGAAGGAGGCAATGAAGAAGAAGAAGAAGAAGAAGGGGAGGATTCATGAAGTTAGGTATATGGATAGTGAAGTTGGTAAGGATCAAGTTGAGGATGAGGATAATGATGATGGGGGTGTGGTTGTGGAGGAAGATTCTGAGGATGATGAAAAGGTTAGTGGAGAATTGGCGAATAAGAAGAGGAAGAAAGGAGTTAAAAAGGAAAAGGGGGACTTCGGCGAGTTGAGTGGTGTAAAAGGATTGAAGAAATCTTCTAAGGAAAAGAGTAAGGAGGGTGGCAAACAGAAGAAAGAACGGGTGTCTGCGAAAGTGATGAAGGAAAATTCGGACAAGCAAAGTAAAAATAGCGGTTTCTCTGTCGAGGATGGAGAGTCTAGGAAGAAGAGCAAGAAGAAGAATGGGCTACCTCAGTCAGTTGGAGCTGATATGAAAAAGAAAGTAAATGCTCAGAGAACAACATGGACGATTTCAAAGCCGGGGAGAGTAGGAGGTTACAAGGTGTTAAAGTGGGAAGTCACTGCCCTTCAATCAGACACCTTTTATTTGCAGATGATTCACTGCTACTCTGCAAAGCATCACAGGAGCATTGTGGTAATATTATGGAGGTACTCCAAGACAATGAAAGGGGTAGTGGGCAAAAAATTAATCTCCACAAGTTAG 1494 0.5007 MASAAPQRVPLEKVQGAVEALLKWRDSNSQSQKPKLFDQDEEFVYLVLTLKKIPPKGRTNPYKVPLPHALASPFSETCLIIDDRPNSNLTKDDAQKKIKAENVAVSKVLKLSKLASDYRPFEAKRKLCDSYDMFFVDRGVATLLPRLLGKKFFKKKKVPVQVDLRKRNWKEQVERACSSALFFVGTGTCSVVKVARVSMERDEIVDNVVAAIDGVIDVVPKKWGNVRSLHVKLLESLALPVYQAVPDVRLRIEGGKGEKENVVVEEKEKEEEEVSGASAKEAMKKKKKKKGRIHEVRYMDSEVGKDQVEDEDNDDGGVVVEEDSEDDEKVSGELANKKRKKGVKKEKGDFGELSGVKGLKKSSKEKSKEGGKQKKERVSAKVMKENSDKQSKNSGFSVEDGESRKKSKKKNGLPQSVGADMKKKVNAQRTTWTISKPGRVGGYKVLKWEVTALQSDTFYLQMIHCYSAKHHRSIVVILWRYSKTMKGVVGKKLISTS* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0562 497 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 4 303 - -
Dod04g0562 497 Gene3D - 88 179 IPR016095 -
Dod04g0562 497 MobiDBLite consensus disorder prediction 270 418 - -
Dod04g0562 497 PANTHER RIBOSOMAL L1 DOMAIN-CONTAINING PROTEIN 1 4 303 - -
Dod04g0562 497 Pfam Ribosomal protein L1p/L10e family 35 236 IPR028364 -
Dod04g0562 497 CDD Ribosomal_L1 14 241 IPR028364 -
Dod04g0562 497 SUPERFAMILY Ribosomal protein L1 35 242 IPR023674 -
Dod04g0562 497 MobiDBLite consensus disorder prediction 305 329 - -
Dod04g0562 497 MobiDBLite consensus disorder prediction 330 388 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0562 130 232 Cytoplasmic Ribosomal Protein Gene Family AT2G27530 29.126 1.41e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0562 K14775 - ahf:112697689 455.677