Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0542 ATGGCCTCTCTGTTACCTTGCGCGCCCAACATAGTCCCTGCTCCGTTCGGGAACCGGACCGGGATCCCGCTCTTGAGCCGCCCTCACTCCTTCGCTCTATCCGGTTCGACCAATAGCTTCCTCCGCGGTTCGCTTTCGGTCGCGCGGTTCGGGTTCAAGCCCGGGTTCTTGCCCGAACCCGACGGCGCCGAAGAGTTGATCAGGGAGCTGTTTGGAAGGGCAGAGGGGTTTCTCTACACCGTTGCCGATGCCGCCGTTTCCAATTCCGACACGGCGGCGACGACCACCGCCGCAAAACAGAACAGCGATTGGCTCTCCGGAATCACCAACTACATGGAAACTGTCCTCAAGGTACTCAAGGATGGGCTTTCTACTTTGCATGTGCCATATGCTTATGGTTTTGCAATTATACTGCTTACCGTTCTTGTAAAAGCTGTCACGTTTCCGTTGACTAAAAAACAGGTAGAATCTGCCTTGGCTATGCGATCGTTGCAACCTCAAATAAAGGCTATCCAGCAACAGTATGCTGGTGATCAGGAGAGAATTCAACTTGAAACTGCTCGGTTGTATAAATTGGCAGGCATTAATCCTTTTGCAGGGTGCCTGCCGACACTTGCAACAATACCAGTGTGGATTGGGCTATATCGAGCCCTATCAAATGTGGCAGATGAGGGACTCCTTACTGAAGGTTTCTTTTGGATTCCTTCTCTTGCTGGTCCAACTACAATTGCAGCTCGTCAAAATGGTAGTGGTATCTCTTGGCTTTTTCCTTTTGTGGATGGTCACCCTCCCCTTGGATGGTCAGATACATTGGCTTACCTTGTCTTGCCTGTCTTACTGGTTGTCAGTCAGTACATCTCTGTCCAAATAATGCAATCATCGCAGGCTAATGATCCCAACATGAAGAGTTCTCAAGCCATAACCAAGCTCCTTCCATTAATGATTGGTTATTTTGCTCTTTCAGTTCCTTCTGGTCTTAGCCTTTATTGGTTAACAAATAATATATTGAGCACTGCACAACAAGTATGGCTTCAAAAGTTGGGCGGTGCAAAAAATCCTCTGGGGAAAATCCAAGATGATATTATAAAGGATGACCTAATGCAGATTCAGAAGTCTGTATCTAAAGTGAATTCCACAAAAGCAGAAGAAGCTAGACAGGGTGAGAAATCAACATCTGCAGGGCCACAACCTGGTGAAAGATTTAGGCAACTGAAAGAGCAAGAGGCAACGAGAAGACAACAAAGAGAAGAAGAAAAAAGGAAAGCTGAGGAAGCAGCAGCCAAAGCAACTAAAATGTCCGAGAATAATGAGAAATCTGCTGAAGGGGGACATCAAGATGGGGGTGATACGGCGGTTGAAAAATCTCAGGCTGTGGCTGCTGATACTGATCCATCCACGTCCCGAGTAGTCATAAATGGTAATCCATTAAGTAAAGACTTGGAGGGAAATCAGAATTCTACATCTACAACTCAGACAGAAAATAATGAAGTTTCTTCTCCTTTCAGTGTTGGAATGAAAGAGAAAAGTATAGAAGAGGAACCAAGAGAAGTATTAACAACTACAGCTACCACAAACAAGCAACATTCTGGAGAAGACCCAGATCACGTGACAAAGGACTGA 1620 0.463 MASLLPCAPNIVPAPFGNRTGIPLLSRPHSFALSGSTNSFLRGSLSVARFGFKPGFLPEPDGAEELIRELFGRAEGFLYTVADAAVSNSDTAATTTAAKQNSDWLSGITNYMETVLKVLKDGLSTLHVPYAYGFAIILLTVLVKAVTFPLTKKQVESALAMRSLQPQIKAIQQQYAGDQERIQLETARLYKLAGINPFAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTLAYLVLPVLLVVSQYISVQIMQSSQANDPNMKSSQAITKLLPLMIGYFALSVPSGLSLYWLTNNILSTAQQVWLQKLGGAKNPLGKIQDDIIKDDLMQIQKSVSKVNSTKAEEARQGEKSTSAGPQPGERFRQLKEQEATRRQQREEEKRKAEEAAAKATKMSENNEKSAEGGHQDGGDTAVEKSQAVAADTDPSTSRVVINGNPLSKDLEGNQNSTSTTQTENNEVSSPFSVGMKEKSIEEEPREVLTTTATTNKQHSGEDPDHVTKD* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0542 539 Pfam 60Kd inner membrane protein 132 346 IPR001708 GO:0016021|GO:0032977
Dod04g0542 539 MobiDBLite consensus disorder prediction 374 539 - -
Dod04g0542 539 PANTHER OXA1 24 466 IPR001708 GO:0016021|GO:0032977
Dod04g0542 539 PANTHER BNAA09G28180D PROTEIN 24 466 - -
Dod04g0542 539 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 132 346 IPR028055 -
Dod04g0542 539 MobiDBLite consensus disorder prediction 459 502 - -
Dod04g0542 539 MobiDBLite consensus disorder prediction 401 448 - -
Dod04g0542 539 Coils Coil 404 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0542 Dod-Chr4 7794135 7802075 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0542 67 419 Chloroplast and Mitochondria Gene Families AT2G28800 55.775 1.50e-132 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0542 K03217 - gmx:100802546 761.911