Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0529 ATGGATAGAAAGCAAGAGCAAGACAAAGGGAACACTAATAGGCCTGGCATTGATGATGCTACTCTCATATCTCCCACCAAAGTCCCAAAAGCAGTTTCACCAGTCTCTTCCGCAGCTGAGGGAGAAGCCTTAAGGCGGCCACGTGGCAGGCCAGTAGGCTCTAAGAACAAGCCAAAGCCACCAATAATTGTCACAAGGGACAGTGCCAATGCACTCAAGGCTCATGCCATGGAAGTGAGCTCTGGCTGTGATGTGAATGAGAGCTTGTTGAACTTTGCAAGGAGGAAGCAACGTGGCCTTTGCATACTAAGCGGAACTGGCTGTGTAACAAATGTGACCCTGCGCCAACCAGCATCATCTGGAGCCATTGTGACCCTTCATGGAAGATTTGAGATCCTCTCACTTCTGGGGTCAATCCTTCCCCCACCAGCACCATCAGGGATCACTGGCCTCACAATTTACTTAGCTGGTGCTCAAGGACAAGTTGTGGGGGGTGGTGTTGTTGGTGCCTTGATTGCTTCAGGACCTGTTGTGATCATGGCTGCATCATTCATGCATGCTACCTTTGATCGTCTTCCATTGGAAGATGATGGACTTGATGCTGCAATACAGAATAACCATTACCGAAATGGACGCACCACACACCACATTGATGTCTCAGATTTATATGCACTGCCACAGAACCTGATCACTAATGGTACAATGGCCCCAGAAATATATTCATGGGCACCCTGGAGGAACTTGTCAAAAACCTGA 756 0.4868 MDRKQEQDKGNTNRPGIDDATLISPTKVPKAVSPVSSAAEGEALRRPRGRPVGSKNKPKPPIIVTRDSANALKAHAMEVSSGCDVNESLLNFARRKQRGLCILSGTGCVTNVTLRQPASSGAIVTLHGRFEILSLLGSILPPPAPSGITGLTIYLAGAQGQVVGGGVVGALIASGPVVIMAASFMHATFDRLPLEDDGLDAAIQNNHYRNGRTTHHIDVSDLYALPQNLITNGTMAPEIYSWAPWRNLSKT* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0529 251 ProSiteProfiles PPC domain profile profile. 69 205 IPR005175 -
Dod04g0529 251 MobiDBLite consensus disorder prediction 1 63 - -
Dod04g0529 251 SUPERFAMILY AF0104/ALDC/Ptd012-like 69 201 - -
Dod04g0529 251 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 4 250 IPR014476 GO:0003680
Dod04g0529 251 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 16 4 250 - -
Dod04g0529 251 Pfam Plants and Prokaryotes Conserved (PCC) domain 74 184 IPR005175 -
Dod04g0529 251 Gene3D - 73 209 - -
Dod04g0529 251 CDD DUF296 75 155 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0529 Dod-Chr4 7592603 7593358 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0529 1 250 AT-hook Motif Nuclear Localized (AHL) Family AT2G42940 66.135 7.50e-102 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0529 - - vra:106765118 400.593