Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0519 ATGGAGATGGACTACGCTACAGCCTTCTCCCACTCTCAACTCGATCGACGCCCTCGAAAAAGGCCTAAATTGGCTTGGGATCTTCCTCAAACCCACTCAAAGGCTCTTTCTGGGATGTATTATGGACAAGAAGTTGCGAATTTGACAAGCTATGGAACGTCGAGGGTACTTCCTGAACATGCTGGTCTGTTTGTAAAGGGATTAGCTGAAAAGGCCTCTCCTCAATGGCGAGAGGATGGCAAAGATGGACATTACGTGTTTGCGCTTGGAGACAATTTAACTTCTCGGTATAAGATCCTCAGGAAAATTGGTGAAGGGACTTTTGGTCAGGTTTTGGAATGTTGGGATAGAGAAACAAGGGAGATGGTTGCCATAAAAGTTGTGCGGAGTATTAAGAAATATCGTGAAGCAGCAATGGTAGAAGTTGACGTGCTTCACTTGCTTGGGAAATATGACAGGAATGGCAGCCGCTGTGTTCAAATACGGAACTGGTTTGACTACCGTAACCATATTTGTATTGTATTTGAGATGCTTGGACCAAGCTTATATGATTTTCTTCGGAAGAACAATTATCGCCCATTTCCGGTTGATCTTGTCCGTGAGCTAGGCAGACAACTGTTGGAATGTGTAGCATTCATGCATGATTTGCGCCTCATACACACTGACTTGAAGCCCGAAAATATACTGTTTATTTCCCCAGAGTATGTGAAAATGCCTGATTACAAGGTTACATTCCGGTCACCAAAAGAGGGAGCCTCTTATAAGAGACTGCCAAAGTCAAGTGCTATTAAGGTCATTGATTTTGGTAGCACAGCCTACGAGCACCAAGATCATAACTATATTGTATCTACTAGGCATTATCGAGCACCTGAGGTTATTCTTGGACTTGGATGGAGTTTTCCTTGTGACATATGGAGTGTTGGCTGCATTTTGGTTGAGTTGTGCTCGGGAGAAGCTTTGTTTCAGACACATGAGAATTTAGAGCACCTAGCCATGATGGAGAGGGTTTTGGGCCCAATACCTCAGCACATGTTGAAAAGAGCAGAGTGTGTAACATTTCAAATGATTAAAATAGTTTTCTTTTTATTGGTTTGTGTCAATGTTTCATATAAACATATATTTGATATTCTCCAACTGCTTCTGTCTCTTACTTTATCGCACAGCCGGCATGCAGAGAAGTATGTCAGAAAGGGTAGGCTGAACTGGCCGGAAGGAGCAGTCTCTCGAGAAAGCATCAAGGCTGTCTTGAAACTACCTCGTCTTCCTAATCTGGTGATGCAGCATGTGGATCACTCTGCTGGGGATCTTCTTGATCTCTTGCAGGGTCTACTGCGGTTCGACCCCTCCACTAGGCTGAAAGCTCATGAAGCTCTGAGGCATACATTCTTTACTGGGGAGCATCACCAGAGAATTTAA 1416 0.4386 MEMDYATAFSHSQLDRRPRKRPKLAWDLPQTHSKALSGMYYGQEVANLTSYGTSRVLPEHAGLFVKGLAEKASPQWREDGKDGHYVFALGDNLTSRYKILRKIGEGTFGQVLECWDRETREMVAIKVVRSIKKYREAAMVEVDVLHLLGKYDRNGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVRELGRQLLECVAFMHDLRLIHTDLKPENILFISPEYVKMPDYKVTFRSPKEGASYKRLPKSSAIKVIDFGSTAYEHQDHNYIVSTRHYRAPEVILGLGWSFPCDIWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRAECVTFQMIKIVFFLLVCVNVSYKHIFDILQLLLSLTLSHSRHAEKYVRKGRLNWPEGAVSRESIKAVLKLPRLPNLVMQHVDHSAGDLLDLLQGLLRFDPSTRLKAHEALRHTFFTGEHHQRI* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0519 471 PANTHER KINASE AFC1 1 351 - -
Dod04g0519 471 PANTHER KINASE AFC1 387 470 - -
Dod04g0519 471 Gene3D Transferase(Phosphotransferase) domain 1 378 463 - -
Dod04g0519 471 Gene3D Transferase(Phosphotransferase) domain 1 151 349 - -
Dod04g0519 471 ProSitePatterns Protein kinases ATP-binding region signature. 103 133 IPR017441 GO:0005524
Dod04g0519 471 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 1 351 - -
Dod04g0519 471 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 387 470 - -
Dod04g0519 471 SMART serkin_6 97 463 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g0519 471 MobiDBLite consensus disorder prediction 1 23 - -
Dod04g0519 471 ProSiteProfiles Protein kinase domain profile. 97 463 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g0519 471 CDD PKc_CLK 84 463 - -
Dod04g0519 471 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Dod04g0519 471 Gene3D Phosphorylase Kinase; domain 1 84 177 - -
Dod04g0519 471 Pfam Protein kinase domain 97 463 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g0519 471 SUPERFAMILY Protein kinase-like (PK-like) 84 467 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0519 Dod-Chr4 7412537 7418258 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0519 97 344 Core Cell Cycle Gene Families AT1G76540 26.255 1.54e-22 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Dod04g0519 Pkinase 5.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0519 K08287 - qsu:112037155 746.117