Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0518 ATGTTAGGAGAACAAGGGAAGAACAAGCCCTCTGGTGGCAATGAAATTGCTCGGAGAACCTATTCCCGTTCTGCTTCATGGAATGATAGGTCCCCCAATAGCCGCAACAAGCTGCCACCACCACCACCTTCTAGTAGCAAACCAAGGCCATTGTTGCCACCCCTTCAGCCTCTCTCCATCAACAAGCGCAGTGTCGAGGAATGGCCTAGTGCAGGATCTGATGATCTTGGTGTCTGGCCACTTCCACAGACCCCAAGAGGGTCCATTAGACCCTATGATTCAAGTCAACCAACCAAAGATTTTCAGTTCAAGAGGGACAAGTTGGCCTTCTTTGACAAGGAGTGTTCCAGGATTGCTGAGCACATATACTTGGGGAGTGACACAGTGGCCAAGAACCATGACCTTCTGAGGCAAAAGGGGATAACTCATGTGCTCAACTGTGTTGGTTTCGTTTGTCCTGAGTATTTCAAGAGTGATTTTGTGTACAAAACACTTTGGTTGCAGGATAGCCCCTCAGAGGATATCACCAGCATCCTCTATGATGTGTTTGATTACTTTGAAGATGTCAGGGAGCAAGGTGGTCGTGTCCTTGTTCATTGTTGTCAGGGTGTTTCTAGATCAACATCCCTTGTGATTGCCTATCTCATGTGGAGGGAGGGACAAAGCTTTGAAGATGCTTTTCAGTATGTGAAGACTGCAAGGGGGGTGACAAATCCAAACATGGGTTTTGCATGTCAACTTCTCCAGTGCCAGAAAAGGGTGCATGCTATGCCTGCAAGTCCAAACTCTATTGTTAGGATGTACCGGATGGCTCCTCACTCGCCCTATGACCCTCTTCATCTGGTCCCCAAGATGGTGAACCAGCCAAGTGCACAAGCACTTGATTCTCGTGGTGCTTTCGTTGTCCATATTCCTTCTGCTATTTATGTATGGAATGGAAAACATTGCAGCTCGGTGATGTCATGCAGTGCAAGAGGTGCAGCCTTTCAGGTCATCCGTTATGAGAGCGCAAAGGGTCCAATTTTGACAATCCATGAGGGTGAAGAGCCACCCCAGTTTTGGACTGCTCTGTCAGGTAAATCTGACAAAGAAGGGGTCATGGAGGAGCCAGTGTTGCCTCCTCAAAGCGTGAAGATTGGCAACATGGTCAACGTGGGGATTGGTACAAGGAAAGTTGATGCATATGATTTGGATTTTGAGATCTTCCTCAAGGCACTTGCTGGTGGGGTTGTTCCTCCTTTCTCTGTGTCCAGTGCAGGGACAGAGACTTGCCTTCCTGCTAGAGAACATGGCTGGGGAATACTGAGGCGGAAGCTTGCTAGTGGTGTCATGAAAGAATTTTTAACATCCCCTAAATGGAACTGCGATGCAGTCTCATGGAATGATGCATCCAATTCCAGTGTGATTATGGAAGAAGAAAATCAGCATTCTGTTGTTGAACCTTTGTCACCATCATCGAATCATCCCTGTGGTTCACCGGATTCCTTCGAATGTTATCTGAATAACAGCTCAGACGAGACAGCAGAAGATACTCATGGAGCCATAGATTCATCTGTTCCTGGTGTTGCTTCATCACTGCCACCATCTCCTCCAGGCATATCAAATCATTTTCCTTGTTTTCTTAGCAGCAGTCCAAAACTCTATTGCAAGTCACCAACACTTTCACCTTCAAGCTCTGATTACGCCAGTTCATTTACCTTTTCACCTTCCTCTACCAACTGGTCAGACTTGTCATTTGTATCCTCTAGGCAGCCATCACCTTCTGGATTGGAATCAACTGAACCCTTTTATGCAAAAGATGCATCTTTCTCAGAGAGTTCCTCTTTATTTCAAAAAGTTGTCTCTTCAACTTCAGAGGCATTTTTGGCTAATCACACCTTTGGAGGGGCAAACTCCTTTTTGCAACTGAAAGGATCATCCCTCTCCATCGCAGAACGCAGAGGGAGTAGTCCGCCACCTCGCATGTTGCTGTCCTCTATCAATGAATCCTCTCATGTCCACAAGAACCTGGAAATGGCTAACATCAAATGCTGA 2034 0.4661 MLGEQGKNKPSGGNEIARRTYSRSASWNDRSPNSRNKLPPPPPSSSKPRPLLPPLQPLSINKRSVEEWPSAGSDDLGVWPLPQTPRGSIRPYDSSQPTKDFQFKRDKLAFFDKECSRIAEHIYLGSDTVAKNHDLLRQKGITHVLNCVGFVCPEYFKSDFVYKTLWLQDSPSEDITSILYDVFDYFEDVREQGGRVLVHCCQGVSRSTSLVIAYLMWREGQSFEDAFQYVKTARGVTNPNMGFACQLLQCQKRVHAMPASPNSIVRMYRMAPHSPYDPLHLVPKMVNQPSAQALDSRGAFVVHIPSAIYVWNGKHCSSVMSCSARGAAFQVIRYESAKGPILTIHEGEEPPQFWTALSGKSDKEGVMEEPVLPPQSVKIGNMVNVGIGTRKVDAYDLDFEIFLKALAGGVVPPFSVSSAGTETCLPAREHGWGILRRKLASGVMKEFLTSPKWNCDAVSWNDASNSSVIMEEENQHSVVEPLSPSSNHPCGSPDSFECYLNNSSDETAEDTHGAIDSSVPGVASSLPPSPPGISNHFPCFLSSSPKLYCKSPTLSPSSSDYASSFTFSPSSTNWSDLSFVSSRQPSPSGLESTEPFYAKDASFSESSSLFQKVVSSTSEAFLANHTFGGANSFLQLKGSSLSIAERRGSSPPPRMLLSSINESSHVHKNLEMANIKC* 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0518 677 PANTHER MKPA PROTEIN 10 618 - -
Dod04g0518 677 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 105 256 IPR029021 -
Dod04g0518 677 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 173 234 IPR000387 GO:0016311|GO:0016791
Dod04g0518 677 MobiDBLite consensus disorder prediction 35 55 - -
Dod04g0518 677 SMART dsp_5 114 253 IPR020422 GO:0006470|GO:0008138
Dod04g0518 677 ProSiteProfiles Dual specificity protein phosphatase domain profile. 114 256 IPR020422 GO:0006470|GO:0008138
Dod04g0518 677 ProSitePatterns Tyrosine specific protein phosphatases active site. 198 208 IPR016130 GO:0016311|GO:0016791
Dod04g0518 677 SUPERFAMILY Actin depolymerizing proteins 260 363 - -
Dod04g0518 677 CDD DSP 115 249 - -
Dod04g0518 677 Gene3D Protein tyrosine phosphatase superfamily 93 256 IPR029021 -
Dod04g0518 677 PANTHER PROTEIN-TYROSINE-PHOSPHATASE MKP1 10 618 - -
Dod04g0518 677 MobiDBLite consensus disorder prediction 15 34 - -
Dod04g0518 677 Pfam Dual specificity phosphatase, catalytic domain 122 252 IPR000340 GO:0008138|GO:0016311
Dod04g0518 677 Gene3D Severin 265 364 IPR029006 -
Dod04g0518 677 SMART VILL_6 269 360 IPR007122 GO:0051015
Dod04g0518 677 MobiDBLite consensus disorder prediction 505 527 - -
Dod04g0518 677 MobiDBLite consensus disorder prediction 1 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0518 Dod-Chr4 7402091 7404829 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0518 38 150 Protein tyrosine phosphatase (PTP) family AT3G55270 50.407 1.76e-30 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0518 - - lja:Lj6g3v0574850.1 946.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0518 04 7402091 7404829 Dod04g0518 04 7402091 7404829 ECH
Dod04g2348 04 47313170 47314633 Dod04g0518 04 7402091 7404829 PCT