Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0514 ATGGGATTGTTCACTTTCGTGCTGCGCAAATCCGGCGACGAATGGACGGCGAAGCAGTTTTCCGGCGACATCGAGGAATCGTCTCCTGACACCTTCGAGATCCAACGCAAGCTCGTTAAGGCCGCCCTCGCCGCCGATTCCTCCGGCGCCGTCCAGTCCTCTTTGTCCCTCGTTTCCCCTACCTCCGCCGTCTTCCAGGTGATTGTGGGCGGTGCAGTATTTGTTGGAGGTGGTGTAGCTGCAGCACCTGCAGCTGGAGCCACCCCTGCTAGTGAGGCTGCCCTGGCTGCAGAAAAGAAGGAAGAAAAGGTTGAGGAAGAAGAAGAGGATGAAGATTTGGGATTGTCACTCTTTGATTAG 360 0.5611 MGLFTFVLRKSGDEWTAKQFSGDIEESSPDTFEIQRKLVKAALAADSSGAVQSSLSLVSPTSAVFQVIVGGAVFVGGGVAAAPAAGATPASEAALAAEKKEEKVEEEEEDEDLGLSLFD* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0514 119 Coils Coil 90 110 - -
Dod04g0514 119 Pfam 60s Acidic ribosomal protein 63 118 - -
Dod04g0514 119 MobiDBLite consensus disorder prediction 96 119 - -
Dod04g0514 119 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P3-1-RELATED 1 119 IPR044252 GO:0003735|GO:0005840
Dod04g0514 119 MobiDBLite consensus disorder prediction 103 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0514 Dod-Chr4 7361313 7363673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0514 1 69 Cytoplasmic Ribosomal Protein Gene Family AT4G25890 65.217 3.75e-27 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0514 K02942 - gmx:100804776 100.138