Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0489 ATGGAAGAACGGTATGAGATCATGAAAGATATTGGGTCAGGGAACTTTGGGGTAGCAAAGCTGGTAAGGGAGAAACGCAGCGGTGAGCTCTGCGCTGTCAAGTTCATTGAGAGAGGCCTAAAGATTGATGAGCATGTGCAAAGAGAAATTATAAACCATAGGTCCTTGAAACACCCCAACATCATTAGATTTAAGGAGGTGCTGTGTACTCCAACTCATCTAGCCATAGTAATGGAATATGCTGCAGGGGGAGAACTATTTGAAAGAATATGCATTGCTGGTCGATTCAGTGAGGATGAGGCAAGGTATTTCTTCCAGCAATTGATTTCTGGAGTCAGCTATTGCCATTCAATGGAAATTTGCCACAGAGATCTTAAACTGGAAAACACACTTTTAGATGGGAGCTCAGCACCATTAGTTAAAATATGCGACTTTGGATACTCAAAGTCATCTGTTCTGCACTCCCAGCCCAAATCCACCGTAGGAACCCCGGCATATATTGCACCAGAGGTCTTGTCAAGAAGAGAATACGATGGGAAGGTTGCTGATGTTTGGTCTTGTGGCGTGACCTTATATGTGATGCTCGTTGGTGGTTATCCTTTTGAAGATCCGGATGATCCACGAAACTTCAGAAAAACAATTCAGCGAATCCTTAGTGCCCACTATTCTATTCCAGACTATGTTCGTGTCTCAAAAGATTGTAGGCAACTTCTATCTCGAATATTTGTAGCCAACCCGGAGAAGAGAATCACCATACCAGAGATTAAAATGCACCCGTGGTTCCTAAACAACTTGCCAGTGGAACTTATGGACGAAGGGGAAGGTAAGTTGCAAAATGACGTGCATGTTTCATCTCAAACCATTGAGGAAATACTGTCCATAATTCAGGAGGCTAGGAAGAATATTGGGGAGGGCCCAAGATTTGGTGGGCAATTTGTTGGGGGTAGCATGGATCTTGATGACATGGATGCAGATGCTGACATTGACGATATAGAAGAAACAAGTGGCGATTTTGTCTGTGCATTGTGA 1029 0.4354 MEERYEIMKDIGSGNFGVAKLVREKRSGELCAVKFIERGLKIDEHVQREIINHRSLKHPNIIRFKEVLCTPTHLAIVMEYAAGGELFERICIAGRFSEDEARYFFQQLISGVSYCHSMEICHRDLKLENTLLDGSSAPLVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRREYDGKVADVWSCGVTLYVMLVGGYPFEDPDDPRNFRKTIQRILSAHYSIPDYVRVSKDCRQLLSRIFVANPEKRITIPEIKMHPWFLNNLPVELMDEGEGKLQNDVHVSSQTIEEILSIIQEARKNIGEGPRFGGQFVGGSMDLDDMDADADIDDIEETSGDFVCAL* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0489 342 PANTHER SERINE/THREONINE KINASE 3 336 - -
Dod04g0489 342 Gene3D Phosphorylase Kinase; domain 1 1 80 - -
Dod04g0489 342 Gene3D Transferase(Phosphotransferase) domain 1 81 267 - -
Dod04g0489 342 PANTHER SERINE/THREONINE-PROTEIN KINASE SAPK1 3 336 - -
Dod04g0489 342 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
Dod04g0489 342 SMART serkin_6 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g0489 342 CDD STKc_SnRK2 4 260 - -
Dod04g0489 342 Pfam Protein kinase domain 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g0489 342 ProSitePatterns Protein kinases ATP-binding region signature. 11 34 IPR017441 GO:0005524
Dod04g0489 342 ProSiteProfiles Protein kinase domain profile. 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g0489 342 SUPERFAMILY Protein kinase-like (PK-like) 3 269 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0489 Dod-Chr4 6918978 6924790 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0489 4 290 CBL-interacting serine-threonine protein kinases AT4G24400 42.905 4.35e-70 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Dod04g0489 Pkinase 9.6e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0489 K14498 - gmx:100807981 594.734