Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0452 ATGGATTCTTCAGCAGCGCACACCTGCAATAAATCTGAGGATTATAAGCAGGTAGACGTTGAGAAGAACGCATCATCGCAGGGCAGTACTGTAAGGTCTCAGTGGGTGCTTAACGCTCCTGAGCCCCCAAGTCCCTGGCGTGTGGTTGCAGATTCTTTGGGGAAAACCATCTCTCAGTGCAAAGATAAGGTTTCTTCACTCAGAGATCAACCCTGCACCACAGTACTCCTGCTCTACGCCTTGCAGAGGATTTTTCCTATCTTTGATTGGGGCAGGAACTATACTGCAACTAAGTTCAGGAAAGATTTGCTTGCAGGCCTCACTATTGCAAGTCTCTGTATCCCTCAGAGCATTGGGTATGCAACCTTGGCACACCTTGATCCTCAATATGGCCTTTATACAAGTGTTGTGCCACCGCTTATCTATGCTGTAACGGGAACTTCGAGAGAGATAGCAATTGGTCCTGTGGCGGTGGTGTCGCTGCTGTTATCCTCAATGATCCAGAAATTGGTTGATCCCACCGCTGATCCAGTAGCATACACAAAGCTGGTCTTGCTTGCTACTCTCTTTGCTGGTATTTTTCAGACTGCATTCGGACTATTCAGGCTGGGGTTCCTGGTGGATTTCCTCTCCCACGCAGCTATTGTTGGATTTGTGGCAGGAGCAGCCATTGTGATTGGCCTTCAACAGTTGAAGGGACTGTTAGGAGTCACTCATTTTACGTCCAAAACCGACATAATCTCTGTCATCAAAGCCGTCTGGGAAGCACTTCATGATCCCTGGAATCCTCGTAACTTCATCCTCGGATGCTCCTTCTTGATCTTCATCCTAATGACTAGATTTCTGGGAAAAAAGAAGAAGAAGCTGTTCTGGTTGGCATCAATCTCTCCTCTTGTATCTGTCGTGCTGTCAACTCTGTTTGTTTTTCTTACACGCGCGGATAAAAATGGAGTTAAAATTGTGAAACACGTCAAAGGGGGACTGAATCCAAGCTCCATTCATCAGTTGGATTTCAATAATCCCTATGCTGGTGAAGTGGCCAAAATTGGACTAGTCGTTGCTGTTGTTGCCCTCACTGAATCTGTTGCTGTTGGACGGTCTTTCGCATCCATCAAAGGGTACCAACTTAACGGAAACAAAGAAATGGTATCAATTGGCTTCACCAACATCATAGGATCTTTCACCTCCTGCTATGTTGCAACTGGTTCATTCTCTCGTACTGCTGTTAACTATGCGGCCGGCTGTGAAACTCTAGTGTCAAACATCGTTATGGCCATCACTGTGTTGCTATCGCTGCAGTTTTTGACGAAACTCTTGTATTATACTCCAACAGCAATTCTTGCTTCAGTGATCCTCTCTGCTCTCCCGGGACTCATAGACATCAATGAAGCTTGCAAAATTTGGAAGGTTGACAAGCTTGACTTTCTTGCCTGCATTGGAGCCTTCTTCGGGGTACTGTTTGCATCTGTGGAGATTGGTCTACTGGTGGCGGTGGCAATATCCTTTTCAAAGATCATTCTCATCTCAATTCGACCTGGCACAGAAACTTTAGGAAAACTTCCTGGAACTGATTTGTTCTGCGATGTCGATCAGTACCCTATGGCAGTTAAGATTCCTGGGGTGGTGATAACACGCGTCAAGTCTCCCTTGCTTTGCTTTGCAAATGCCAATTTCGTCAGAGAAAGGATCGTCAAATGGGTCACTCAGGAAGAATCAGAGGATGACAAGGGAAATGCAAGAAGCACCATTCAACTCGTAATTCTTGACATGGCCAATTTGGTGAATATTGATACCTCCGGAATTGCTGCTCTGGAGGAACTGCACAAGAGTTTGTCTTCACATGGGAAGCAGTTAGCCATTGCCAACCCTAGGTGGCAAGTGATGCACAAGCTAAAGGTGTCCAACTTTGTTGGCAAAATTGGTGGTAGGGTCTTTCTCACTGTTGAAGAAGCTGTTGGCTCCAAGAACTAG 1971 0.4602 MDSSAAHTCNKSEDYKQVDVEKNASSQGSTVRSQWVLNAPEPPSPWRVVADSLGKTISQCKDKVSSLRDQPCTTVLLLYALQRIFPIFDWGRNYTATKFRKDLLAGLTIASLCIPQSIGYATLAHLDPQYGLYTSVVPPLIYAVTGTSREIAIGPVAVVSLLLSSMIQKLVDPTADPVAYTKLVLLATLFAGIFQTAFGLFRLGFLVDFLSHAAIVGFVAGAAIVIGLQQLKGLLGVTHFTSKTDIISVIKAVWEALHDPWNPRNFILGCSFLIFILMTRFLGKKKKKLFWLASISPLVSVVLSTLFVFLTRADKNGVKIVKHVKGGLNPSSIHQLDFNNPYAGEVAKIGLVVAVVALTESVAVGRSFASIKGYQLNGNKEMVSIGFTNIIGSFTSCYVATGSFSRTAVNYAAGCETLVSNIVMAITVLLSLQFLTKLLYYTPTAILASVILSALPGLIDINEACKIWKVDKLDFLACIGAFFGVLFASVEIGLLVAVAISFSKIILISIRPGTETLGKLPGTDLFCDVDQYPMAVKIPGVVITRVKSPLLCFANANFVRERIVKWVTQEESEDDKGNARSTIQLVILDMANLVNIDTSGIAALEELHKSLSSHGKQLAIANPRWQVMHKLKVSNFVGKIGGRVFLTVEEAVGSKN* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0452 656 ProSitePatterns SLC26A transporters signature. 128 149 IPR018045 GO:0008271|GO:0008272
Dod04g0452 656 Gene3D STAS domain 511 656 IPR036513 -
Dod04g0452 656 PANTHER SULFATE TRANSPORTER 2.1 35 653 - -
Dod04g0452 656 Pfam STAS domain 532 651 IPR002645 -
Dod04g0452 656 MobiDBLite consensus disorder prediction 1 37 - -
Dod04g0452 656 PANTHER SULFATE TRANSPORTER 35 653 IPR001902 GO:0015301|GO:0016020|GO:0055085
Dod04g0452 656 MobiDBLite consensus disorder prediction 21 37 - -
Dod04g0452 656 CDD STAS_SulP_like_sulfate_transporter 532 646 - -
Dod04g0452 656 Pfam Sulfate permease family 99 479 IPR011547 GO:0016021
Dod04g0452 656 ProSiteProfiles STAS domain profile. 551 655 IPR002645 -
Dod04g0452 656 SUPERFAMILY SpoIIaa-like 536 652 IPR036513 -
Dod04g0452 656 TIGRFAM sulP: sulfate permease 86 648 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0452 Dod-Chr4 6230290 6239932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0452 25 652 Inorganic Solute Cotransporters AT5G10180 68.521 0.0 886
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0452 K17469 - gmx:100817831 1090.87