Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0435 ATGAATTCACCATCCACACAGTTTGTTCCCACCAGAAGGATGGGTGTGTATGATCCTATCCACCAGATTAATATGTGGGGAGAAGGCTTCAAGAGTAATGTTAATTTAAGTGCATCCATGCCCTTAATTGATGAGGCAGACATGAAGTTAGATAGTCAGTCAGAGGATGCTTCTCTTGGTATGCTGGGAACAAATAACAATTATGACCAAGAAGCCAATAAACCCACTGATAAGATACAAAGACGTCTTGCCCAAAATCGAGAGGCAGCTCGCAAGAGTCGTTTGCGGAAAAAGGCCTATGTGCAGCAGTTAGAATCAAGTCGTTTGAAGTTGATGCAGATAGAGCAAGAGCTTGAACGTGCAAGACAGCAGGGATTGTATATGGGTGGCGGATTGGATTCTAATCATCTGGCTTTTGGTGGATCTATTAATTCAGGAATTGCAGCTTTTGAGATGGAGTATGGACACTGGGTGGAAGAGCAAAATAGACAAATCCTAGAGTTGAGAACTGCTTTAAATGCTCATATTGTCGACATAGAGCTCAGGATACTTGTAGATGGTATAATGAACCACTATGCTGAAATCTTCCGCATGAAATCTGCTGCTGCAAAAGCAGATGTCTTCTATGTCATGTCTGGTATGTGGAAAACACCGGCCGAAAGATTTTTCTTGTGGATTGGAGGCTTTCGCCCCTCTGAGCTTCTAAAGGTTCTTCTTCCTCTGATCGAACCTTTGACGGAGCAACAACGGTTGGATGTCTGTAACCTCGGACAATCATGTCAGCAAGCAGAAGACGCGCTTTCCCAAGGTATGGAGAAACTCCAGCAAACGCTTGCTGACAGTGTTGCAGCTGGACAACTCGTCGAAGGAAGTTATATTCCGCAGATGGCCTCAGCCATGGAGAAGTTGGAAGCTCTGGTGAGCTTTGTGAACCAGGCTGACCATCTCCGCCAGGAAACCTTGCAGCAGTTGTCTCGAATACTTACAATCCGTCAGGCGGCTCGATGCTTGCTTGCCTTGGGTGAATATTTCCAACGCCTGAGAGCTCTGAGCTCGCTTTGGTCAAATCGTCCCCGCGAACCTGCTTAG 1089 0.4601 MNSPSTQFVPTRRMGVYDPIHQINMWGEGFKSNVNLSASMPLIDEADMKLDSQSEDASLGMLGTNNNYDQEANKPTDKIQRRLAQNREAARKSRLRKKAYVQQLESSRLKLMQIEQELERARQQGLYMGGGLDSNHLAFGGSINSGIAAFEMEYGHWVEEQNRQILELRTALNAHIVDIELRILVDGIMNHYAEIFRMKSAAAKADVFYVMSGMWKTPAERFFLWIGGFRPSELLKVLLPLIEPLTEQQRLDVCNLGQSCQQAEDALSQGMEKLQQTLADSVAAGQLVEGSYIPQMASAMEKLEALVSFVNQADHLRQETLQQLSRILTIRQAARCLLALGEYFQRLRALSSLWSNRPREPA* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0435 362 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 76 120 IPR004827 GO:0003700|GO:0006355
Dod04g0435 362 Coils Coil 97 124 - -
Dod04g0435 362 PANTHER TRANSCRIPTION FACTOR TGA9 1 361 - -
Dod04g0435 362 Pfam bZIP transcription factor 76 107 IPR004827 GO:0003700|GO:0006355
Dod04g0435 362 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 81 96 IPR004827 GO:0003700|GO:0006355
Dod04g0435 362 PANTHER TRANSCRIPTION FACTOR TGA1 1 361 - -
Dod04g0435 362 CDD bZIP_HBP1b-like 78 130 - -
Dod04g0435 362 SUPERFAMILY Leucine zipper domain 78 119 IPR046347 GO:0003700|GO:0006355
Dod04g0435 362 SMART brlzneu 74 134 IPR004827 GO:0003700|GO:0006355
Dod04g0435 362 Pfam Seed dormancy control 165 239 IPR025422 GO:0006351|GO:0043565
Dod04g0435 362 Gene3D - 77 126 - -
Dod04g0435 362 ProSiteProfiles DOG1 domain profile. 147 357 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0435 Dod-Chr4 6013657 6018813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0435 1 362 Calmodulin-binding Proteins AT5G65210 72.826 0.0 540
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dod04g0435 DOG1 2.3e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0435 K14431 - gmx:100793353 630.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2443 04 48237477 48244024 Dod04g0435 04 6013657 6018813 PCT