Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0421 ATGGATTGTTGTGTCTGCACAACTATGCCATTGATATTAAGGCCTCCAAGGAATACAATATGTGGGGCTTGTTATGAAGGGGCTAAGAGCATAATCAGCATGATGAACAATCTCGAAAGTGAGAAAGAAAAAGGAACCACTAACCCAAATAGTTCTCCTAAAGAAAAAATCAATGAGATTTTTTTTACCCCTCCACAGACACTGGATGATTGTTTAAGATGGTGGTCACAGAAGATAGACCTGTTTAATGAACAAAAAGAAGACTTGGCTTTCCTTAGAGGCTTTGCTGCTGCCTTCAAAGCACAAATTCACACTGATATACTGGTCACTCCAGGTAGCCATGGTCCCCCCATACCTGCACACAGGTCCGTTTTGGCGACAAGATCAGAAATTTTTAAGAACATGCTAGAGTGCGATGAATGCAAAGCTGCACCCAATAACACCATAACCATACCGGATTTGAACCATGAAGAACTAGAGTCTCTGCTGGAGTTTCTCTACAGCGGGGCCTTGCCTGAAGAGACATTGGAGAAGCATGTCTACGCCTTGTCACGAGCAGCTGACAAGTACGCAATCCCACACCTTTTGAAACACTGCGAACGCCACCTTCTCAGTTCACTTAGCACCTCTAATGCCCTTGAGACCCTTGAGATTGCCGACACTTGTTCCAACCACAACTTGAAGGAGATAACCTTGAATTTCCTAGTTGAAAACATTGAGCATGTTGTGTCCTCACCTAAGTTTGAAGCTTTTGTGCACACATGTCCGCACCTAACTGTGCAACTAGTTACGAGGGCTTTTGTGAACGGTGCCAAATAG 819 0.4408 MDCCVCTTMPLILRPPRNTICGACYEGAKSIISMMNNLESEKEKGTTNPNSSPKEKINEIFFTPPQTLDDCLRWWSQKIDLFNEQKEDLAFLRGFAAAFKAQIHTDILVTPGSHGPPIPAHRSVLATRSEIFKNMLECDECKAAPNNTITIPDLNHEELESLLEFLYSGALPEETLEKHVYALSRAADKYAIPHLLKHCERHLLSSLSTSNALETLEIADTCSNHNLKEITLNFLVENIEHVVSSPKFEAFVHTCPHLTVQLVTRAFVNGAK* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0421 272 PANTHER BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED 1 271 - -
Dod04g0421 272 CDD BACK 208 248 - -
Dod04g0421 272 Pfam BTB/POZ domain 101 206 IPR000210 GO:0005515
Dod04g0421 272 ProSiteProfiles BTB domain profile. 105 175 IPR000210 GO:0005515
Dod04g0421 272 SUPERFAMILY POZ domain 91 205 IPR011333 -
Dod04g0421 272 Gene3D - 208 270 - -
Dod04g0421 272 PANTHER BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED-RELATED 1 271 IPR044784 -
Dod04g0421 272 SMART BTB_4 105 207 IPR000210 GO:0005515
Dod04g0421 272 Gene3D Potassium Channel Kv1.1; Chain A 76 207 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0421 Dod-Chr4 5558536 5560803 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Dod04g0421 BTB 3.3e-20 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0421 K10523 - gmx:100777561 442.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0421 04 5558536 5560803 Dod04g0421 04 5558536 5560803 ECH