Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0417 ATGGCTCCGGCGGTCGGAGTCCGCGTCCCCCTCCTGCCGGAATCCACGTCCTCGTCGGCTTCTCCGGCGTCGGTCCCCGGTGCCGTCTTCAACGTCGCCACTAGCGTCGTCGGCGCGGGGATCATGTCGATCCCGGCGATACTGAAGGTCCTCGGCGTGGTTCCCGCCTTGGCCATGATCCTCGTCGTCGCTCTTCTTGCCGAAATTTCCGTTGAGTTTCTGATGAGGTTTACTCACTCGGGCAAAACGACGACGTACGCCGGCATCATGAGGGAGTCCTTCGGGACCATTGGAGCTTTCGCCGTACAAGTTTGTGTCATGATCACCAACGCTGGGGGCCTAATTCTCTACCTAATTATTATTGGGGATGTGCTGTCTGGAAAGCAGAGTGAAGGTGAAGTGCACTTGGGCATTTTGCAGCAGTGGTTCGGGATTCACTGGTGGAATTCTCGGGAATTCGCTCTTTTCATCACTTTGGTCTGCGTTATGCTTCCACTTGTTTTGTACAAACGTGTAGAGTCCTTGAAGTACAGTTCAGCAGTGTCAACTCTTCTGGCGGTGGCATTTGTTGCCATATGTTCTGGGTTGGCAATCGTTGCCATTGTGCAAGGCAAAACAGAAACTCCAAGATGGTTTCCTCGCTTAGACTACCAAACCTCCTTCTTTGATCTCTTCACTGCAGTTCCCGTTGTAGTCACAGCCTTCACTTTTCATTTCAATGTGCATCCAATTGGGTTTGAGCTTGCCAAGCCATCTGATATGACCAAAGCAGTTCGAATAGCATTAATGCTTTGTGCTGTCATATATTTCACAATAGGTCTGTTTGGGTACGTGTTATTTGGGGACTCAACACAATCAGACATTCTCATCAATTTTGACCAGAATACTGGTTCTGCTGTTGGTTCCTTTCTCAATGGCTTAGTCCGTGTAAGCTATGCGTTACACATCATGCTGGTGTTCCCTCTGGTGAACTTCTCCTTGAGAGCCAACATAGATGAACTACTATTCTCCAAGAAGCCTATGCTGTCCGATGATAACAGAAGATTTGTGATCCTCACTCTGGTGCTGCTTGTCTTCTGTTACCTCGCTGCCATAGCGGTTCCGGATATTTGGTACTTCTTTCAGTTTCTGGGGTCAACAACTGCAGTGTGTCTTGCCTTCATTTTTCCTGGCACTATTGTTTTAAGGGATGCTCATGGAGTATCAACAAGGAGGGACAAAATCATAGCACTCGTTATGATTATACTAGCCGTAGTGACAAGTGTAATTGCCATTTCCACCAACTTGTACAATGCCTTTAGTAGCAAGTCATAA 1314 0.4825 MAPAVGVRVPLLPESTSSSASPASVPGAVFNVATSVVGAGIMSIPAILKVLGVVPALAMILVVALLAEISVEFLMRFTHSGKTTTYAGIMRESFGTIGAFAVQVCVMITNAGGLILYLIIIGDVLSGKQSEGEVHLGILQQWFGIHWWNSREFALFITLVCVMLPLVLYKRVESLKYSSAVSTLLAVAFVAICSGLAIVAIVQGKTETPRWFPRLDYQTSFFDLFTAVPVVVTAFTFHFNVHPIGFELAKPSDMTKAVRIALMLCAVIYFTIGLFGYVLFGDSTQSDILINFDQNTGSAVGSFLNGLVRVSYALHIMLVFPLVNFSLRANIDELLFSKKPMLSDDNRRFVILTLVLLVFCYLAAIAVPDIWYFFQFLGSTTAVCLAFIFPGTIVLRDAHGVSTRRDKIIALVMIILAVVTSVIAISTNLYNAFSSKS* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0417 437 Pfam Transmembrane amino acid transporter protein 23 424 IPR013057 -
Dod04g0417 437 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 3 435 - -
Dod04g0417 437 PANTHER AMINO ACID TRANSPORTER 3 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0417 Dod-Chr4 5475218 5477817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0417 7 431 Amino Acid or Auxin Permease AAAP Family AT3G56200 60.890 0.0 517
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0417 - - gmx:100813056 701.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0417 04 5475218 5477817 Dod04g0417 04 5475218 5477817 ECH
Dod04g0417 04 5475218 5477817 Dod08g0632 08 7561325 7565646 PCT
Dod08g0631 08 7556433 7559933 Dod04g0417 04 5475218 5477817 PCT