Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0399 ATGGAGACGGCGGGAAAACCCACCACCATTATCATTAATGAACCCGATGGTCGTTTCCAAGTTTGTGTTAATCGGCATAGATATTTGAATTCTTTAGGCGTGTTTGCTGGGGATAATCCATTCGACTTTGTGGTCCCTCTCACGATATGCCAACTCATTATGTTCTCCATAATCTCTCGAACACTTTACTACGTTCTCAAACCTTTGAAAACACCCAGATTCATCTGCAATGTCATGGCTGGCATTCTGATGGGACCTACATTTATAGGGCGTAACCGTAAATTTCTGGCGTTTCTATTTCCGCCAATGCAAGCTCCGCTGTTACTGACGATGAATAGAATGGGTGTTGTGTATTTTGTTTTCCTCGTTTCACTGAAGATGGACATAGTCACGACCTTAAGATCAGGCAAACGTTGTTGGCGGTTTGGTGTAATACCTTTCATCCTTTGCCATTTGGTAATAGCAGGCCTCTCATATGTGTGTAGGCCCAATGGTGCTGTCGATCCCGCAATAGGAAAGTTGCCAAACGTCTTCGCCTTGAATAGTTTCGCGGTCATTTCTGAATTCTTGCTTGAACTCAACCTTATAACCACGGAATTGGGGCAGATTGCTTTGTCTTCAACCATGGTCGGTGAAATATTGCAATTGTGTGTGTTGTTGATCGCAAGCATCACTACTTCACACATAAAGGATGCAATTGCCTTTTTGAGTTGCGCCTGCGCCTTCTTGTTAATATGTGTTTATGTCGTGCGACCATTGGCGAAGGTTATTATTCAGAGAACACCAATGGGGAAACCAGTGAGGGAAATCTACGTCGTTATGATACTTCTCTGTGTCTTGGTTGTGTCAGCTATTGGCGACGCAATTGGCTTATCATTCATTATTGGACCTATCCTTTTTGGCTTGGTTTTACCTAATGGACCCCCATTGGCAACAACAATCATAGAGAAGAGTGAAGTTGTTATCTCACAAATCGTAATGCCTTTCTTCTTCATACATGTAGGCATAAAGACAGATTTGGGTTCAATTAAGGATTGGCCAGTGGTTATGACATTTCAGTCCATCGTGCTCGCTGGATTCTTCGTAAAGGTGCTTGCATGTGTCTTGGTTGCTCCAACATATAAGATTAGGCCCAGACACGGGCTGGTTCTTGGGCTTATTATGAACGTCAAAGGCTTGATGGAACTGATTTTTTTCACTAGACTGCTCAATGTTAAGACTATTGATGAATCAACGTTCAGTCATGCTGTGCTTTACGTTGTGTTGATCACTGCAATCTGCGCACCCTTGATCATATTCCTGTACAAGCACCGTCCTCGTGTGTCCAGAACAGCAAGCATTTTACACGAAGGGGACGTGAGAACCATCCAGAGCACTCTCCAAACCTCGAATTTCAACGTCGTTTCTTGCATGCACAACGACGGGAATGTGCACGGCATGATTGCTCTTCTAGAAGCCTGCAACCCGAGCCTAGAGAGCCCCATATGCGTCCACGTCATCCACCTCATCGAGCTCTTGGGAAAAAGCACTCCAGTCCTCCTCCCTCTGAACAAGCAGAACAAGAAGCTCTTGTCCATCAACTACCCCAACACCAACCACATCATGCGCGCATTCAATAACTACTCAGCAAACTCCAACGGCCCAGTAACCGTTCTCTCCTACATCAACGTGGCGCCTTTCAACAACATGCATGAGGCCGTTTGCAACCTGGCTGAGGACAACTCGGTGCCTTTCCTCGTGATCCCTTTCCACGAGACCGACCAAGTCATCAACCAACACGTGGCGACCTCGATTCACGGCCTCAACATTAGCTTCCAGGCTCACGCGCGCTGCACTGTGGGGATACTGGTGGACAAGTTCTCGAAACTGGCGATAACCGGCTGCAAGTTTTGTTTCCACGTGGCTATATTCTTCATTGGTGGACCGGACGACAGAGAGGCACTGGCGTTGGGGATTCGAATGTTGAACCGCGTGAACACAAGGGTCACGTTGTTGCGGTTCGTGGTAGAGAATAACAACAATAATGATGATGAAAGTTTGTCGGAGGTAGGTGTAGGTCAAACGGTACTAGGAAAACAAGAAGGGAAAGAAGAAGAAGATGATGATGAGGGGGCGTTGGACAACAGTTTAGTGGATGAGTTCAAGGGTAAGAGGCTTAATTACGATAATGCAGTTTGCCATGAGGTTTTGGTGGAGGACAACATGGAAAATATCTTGGGAGCTATAAGGGATATGGAGAAGGAATTGTATGACCTTGTGATAGTGGGTAAAAGGCATTGCGTTGGGAATTTGACGGATGAAGAGATGACGGCTTTTATGGACAATGCGGATCAGTTGGGAGTTGCTGGGGACATGTTGGCGTCGACGGAGTTTCGTGATGGAAAAGTTCCGCTTTTGGTGATGCAGTGTGGTAAGAAGCGTGTCAAGTCCTTCGCGAAGCAAGGCTCAGGCGTTTCGCAATTTTAG 2466 0.4623 METAGKPTTIIINEPDGRFQVCVNRHRYLNSLGVFAGDNPFDFVVPLTICQLIMFSIISRTLYYVLKPLKTPRFICNVMAGILMGPTFIGRNRKFLAFLFPPMQAPLLLTMNRMGVVYFVFLVSLKMDIVTTLRSGKRCWRFGVIPFILCHLVIAGLSYVCRPNGAVDPAIGKLPNVFALNSFAVISEFLLELNLITTELGQIALSSTMVGEILQLCVLLIASITTSHIKDAIAFLSCACAFLLICVYVVRPLAKVIIQRTPMGKPVREIYVVMILLCVLVVSAIGDAIGLSFIIGPILFGLVLPNGPPLATTIIEKSEVVISQIVMPFFFIHVGIKTDLGSIKDWPVVMTFQSIVLAGFFVKVLACVLVAPTYKIRPRHGLVLGLIMNVKGLMELIFFTRLLNVKTIDESTFSHAVLYVVLITAICAPLIIFLYKHRPRVSRTASILHEGDVRTIQSTLQTSNFNVVSCMHNDGNVHGMIALLEACNPSLESPICVHVIHLIELLGKSTPVLLPLNKQNKKLLSINYPNTNHIMRAFNNYSANSNGPVTVLSYINVAPFNNMHEAVCNLAEDNSVPFLVIPFHETDQVINQHVATSIHGLNISFQAHARCTVGILVDKFSKLAITGCKFCFHVAIFFIGGPDDREALALGIRMLNRVNTRVTLLRFVVENNNNNDDESLSEVGVGQTVLGKQEGKEEEDDDEGALDNSLVDEFKGKRLNYDNAVCHEVLVEDNMENILGAIRDMEKELYDLVIVGKRHCVGNLTDEEMTAFMDNADQLGVAGDMLASTEFRDGKVPLLVMQCGKKRVKSFAKQGSGVSQF* 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0399 821 Gene3D - 47 443 IPR038770 -
Dod04g0399 821 PANTHER CATION/H+ EXCHANGER 3 17 811 - -
Dod04g0399 821 PANTHER CATION/H + ANTIPORTER 17 811 - -
Dod04g0399 821 Pfam Sodium/hydrogen exchanger family 52 432 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0399 Dod-Chr4 5230779 5234741 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0399 13 814 Antiporter Super Family AT2G13620 32.558 1.76e-129 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0399 - - mtr:MTR_3g071880 882.863