Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod04g0384 | ATGAGCAAGAACTGGAAATTCTGCCGCTTCAGAGATCTTCGTGGAGTTCTTCGCCTCCTTGCTCTGTGCTTTGTGTTTCAGAGCTTTGGTCTATGCTGCTCTTTGAACCAAGAAGGTGAAGCTCTTTTGAAGTTGAAGCAAGGGGTTGTGAGTGACCCTTTCGGTGCTTTGTCAAGTTGGGTTGATGATGAAGTAACAGTTGACCCTTGTAATTGGTTGGGAGTTGAGTGCTTGGATGGACAAGTGGTGGTCTTGAATTTGAAAGACCTTTGCCTTGAAGGAAGTCTGGCACCTGAGTTCACGAACCTTGTTCATATAAAGTCCATTATTTTGCGGAACAATTCTTTCTATGGGATCATCCCTGAAGGTATTGTCCACTTGAAAGAATTGGAGGTCTTGGATTTGGGCTACAACAACTTCAGTGGACCTCTACCTGCAGATCTTGGGAGTAATATTTCATTATCAACCCTTTTGCTGGACAACAATGATCTTCTTGGTGGCTTCTCTCCTGAAGTTAACAGATTGAATTTGCTTTCAGAATCTCAAGTAGATGAAAACCAGCTAATTAGTGCAGATAAAAGGCCAACTTGTACAGGAAGACACATCACAGGGTATGCCATTAGGCATTTGAGTATGTCGGCCAAAAGAAAAACAGTTTTCGGAGGCTGCTGGTATTTCGTCGCACGCGGCAGGATGTTCATAATCGAGAAGCAGATCCACCTAGCCCTGCTCCATCCCCTAAGCCACATCCTTCTTTACATTCCACTCAGGCCAAGTCCTGCTTCTGCTTCCCCACAGCCAGATCCTCCTTCACCTTCCCCATCACCAGTGCAGAATCCAGTTTCTCCCAATAAAAATAATTCTGCTTCTCCTCCTACCCCTCTGTCTCCAAGCCCTGGAATACAACATGAAAGCACATCATCAAAGAGCCATCGAGTTGCTATTGTGGGTGGAGTTATCGGTGGTGCTGTATTTCTTATTGTTTCAAGCATCGGCATATATCTCTGTAAAACCAACAAGGTAGCTACTGTAAAACCTTGGGCCACAGGATTAAGCGGACAGCTTCAAAAAGCATTTGTGACAGTATACAAAGGGACTTTATCTAGCGGTGTTGAAATAGCTGTAGCCTCTGTTACAATCACCTCATCCAAGGATTGGTCAAAGACTTCAGAAGCCCAATTTAGGAAGAAGATAGATACATTATCAAAAATGAACCACAAGAATTTTGTAAATCTTCTTGGATATTGTGAAGAAGAGGAGCCTTTCACCAGAATGGTGATTTTTGAATATGCCCCAAACGGAACACTCTTTGAGCATTTGCACATACAAGAAGCTGAGCATTTGGATTGGGGAACAAGACTTAGAGTTGCCATGGGCATGGCTTACTGCTTGCAACATATGCACCACTTGGACCCTCCTATTGCTCACAGCAACCTCAATTCTTCAGCTGTCCAACTCACTGATGATTATGCTGCCAAATTAGCAGATCTGAGTTTCTTGAATGAAGTAGCTTCGGCCGAGATAAAATCCGGTGCTAGAAAACATGCTGACATTACATTAGCGAGCAACGTTTACAGCTTCGGAGTTATATTATTCGAAATGGTAACAGGCCAGCTCCCGTATTCAGATACCAGTTCTCTTGAAGACTGGGCATCACACTATTTGCAAGTGGGGGACCAGCCCCTCAAAGAAATGGTGGATCCAACTCTAGCATCTTTCGAAGAAGAAAAGCTTGAAGAAATTACTGCTTTGATTAAATCTTGTGTCCATCCTGATCCTGATAAGAGACCAACAATGAAAGAAGTTTGTGATAGATTGAGACAGACAACAAAGATAACACCCGAAGCAGCTGTTCCAAAACTTTCTCCACTTTGGTGGGCAGAGCTTGAGATTCATTCTGTGGATGCAAGCTGA | 1914 | 0.4357 | MSKNWKFCRFRDLRGVLRLLALCFVFQSFGLCCSLNQEGEALLKLKQGVVSDPFGALSSWVDDEVTVDPCNWLGVECLDGQVVVLNLKDLCLEGSLAPEFTNLVHIKSIILRNNSFYGIIPEGIVHLKELEVLDLGYNNFSGPLPADLGSNISLSTLLLDNNDLLGGFSPEVNRLNLLSESQVDENQLISADKRPTCTGRHITGYAIRHLSMSAKRKTVFGGCWYFVARGRMFIIEKQIHLALLHPLSHILLYIPLRPSPASASPQPDPPSPSPSPVQNPVSPNKNNSASPPTPLSPSPGIQHESTSSKSHRVAIVGGVIGGAVFLIVSSIGIYLCKTNKVATVKPWATGLSGQLQKAFVTVYKGTLSSGVEIAVASVTITSSKDWSKTSEAQFRKKIDTLSKMNHKNFVNLLGYCEEEEPFTRMVIFEYAPNGTLFEHLHIQEAEHLDWGTRLRVAMGMAYCLQHMHHLDPPIAHSNLNSSAVQLTDDYAAKLADLSFLNEVASAEIKSGARKHADITLASNVYSFGVILFEMVTGQLPYSDTSSLEDWASHYLQVGDQPLKEMVDPTLASFEEEKLEEITALIKSCVHPDPDKRPTMKEVCDRLRQTTKITPEAAVPKLSPLWWAELEIHSVDAS* | 638 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod04g0384 | 637 | Pfam | Leucine rich repeat | 105 | 164 | IPR001611 | GO:0005515 | |
Dod04g0384 | 637 | ProSiteProfiles | Protein kinase domain profile. | 341 | 612 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Dod04g0384 | 637 | Gene3D | Ribonuclease Inhibitor | 33 | 213 | IPR032675 | - | |
Dod04g0384 | 637 | MobiDBLite | consensus disorder prediction | 261 | 279 | - | - | |
Dod04g0384 | 637 | SUPERFAMILY | Protein kinase-like (PK-like) | 359 | 606 | IPR011009 | - | |
Dod04g0384 | 637 | Gene3D | Phosphorylase Kinase; domain 1 | 352 | 430 | - | - | |
Dod04g0384 | 637 | Pfam | Leucine rich repeat N-terminal domain | 36 | 77 | IPR013210 | - | |
Dod04g0384 | 637 | PANTHER | PROTEIN MALE DISCOVERER 2 | 361 | 637 | - | - | |
Dod04g0384 | 637 | PANTHER | PROTEIN MALE DISCOVERER 2 | 1 | 361 | - | - | |
Dod04g0384 | 637 | SUPERFAMILY | L domain-like | 35 | 191 | - | - | |
Dod04g0384 | 637 | Pfam | Protein tyrosine and serine/threonine kinase | 358 | 606 | IPR001245 | GO:0004672|GO:0006468 | |
Dod04g0384 | 637 | MobiDBLite | consensus disorder prediction | 261 | 307 | - | - | |
Dod04g0384 | 637 | Gene3D | Transferase(Phosphotransferase) domain 1 | 431 | 618 | - | - | |
Dod04g0384 | 637 | PANTHER | BNAA09G55080D PROTEIN | 361 | 637 | - | - | |
Dod04g0384 | 637 | PANTHER | BNAA09G55080D PROTEIN | 1 | 361 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod04g0384 | Dod-Chr4 | 5019663 | 5024516 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod04g0384 | 20 | 606 | Receptor kinase-like Gene Family | AT2G42290 | 25.037 | 2.14e-35 | 140 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-VI-2 | Dod04g0384 | PK_Tyr_Ser-Thr | 1.1e-26 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod04g0384 | - | - | gmx:100784541 | 819.305 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Dod04g0384 | 04 | 5019663 | 5024516 | Dod04g0384 | 04 | 5019663 | 5024516 | ECH | |
Dod04g0384 | 04 | 5019663 | 5024516 | Dod08g0667 | 08 | 7802739 | 7806555 | PCT |