Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0384 ATGAGCAAGAACTGGAAATTCTGCCGCTTCAGAGATCTTCGTGGAGTTCTTCGCCTCCTTGCTCTGTGCTTTGTGTTTCAGAGCTTTGGTCTATGCTGCTCTTTGAACCAAGAAGGTGAAGCTCTTTTGAAGTTGAAGCAAGGGGTTGTGAGTGACCCTTTCGGTGCTTTGTCAAGTTGGGTTGATGATGAAGTAACAGTTGACCCTTGTAATTGGTTGGGAGTTGAGTGCTTGGATGGACAAGTGGTGGTCTTGAATTTGAAAGACCTTTGCCTTGAAGGAAGTCTGGCACCTGAGTTCACGAACCTTGTTCATATAAAGTCCATTATTTTGCGGAACAATTCTTTCTATGGGATCATCCCTGAAGGTATTGTCCACTTGAAAGAATTGGAGGTCTTGGATTTGGGCTACAACAACTTCAGTGGACCTCTACCTGCAGATCTTGGGAGTAATATTTCATTATCAACCCTTTTGCTGGACAACAATGATCTTCTTGGTGGCTTCTCTCCTGAAGTTAACAGATTGAATTTGCTTTCAGAATCTCAAGTAGATGAAAACCAGCTAATTAGTGCAGATAAAAGGCCAACTTGTACAGGAAGACACATCACAGGGTATGCCATTAGGCATTTGAGTATGTCGGCCAAAAGAAAAACAGTTTTCGGAGGCTGCTGGTATTTCGTCGCACGCGGCAGGATGTTCATAATCGAGAAGCAGATCCACCTAGCCCTGCTCCATCCCCTAAGCCACATCCTTCTTTACATTCCACTCAGGCCAAGTCCTGCTTCTGCTTCCCCACAGCCAGATCCTCCTTCACCTTCCCCATCACCAGTGCAGAATCCAGTTTCTCCCAATAAAAATAATTCTGCTTCTCCTCCTACCCCTCTGTCTCCAAGCCCTGGAATACAACATGAAAGCACATCATCAAAGAGCCATCGAGTTGCTATTGTGGGTGGAGTTATCGGTGGTGCTGTATTTCTTATTGTTTCAAGCATCGGCATATATCTCTGTAAAACCAACAAGGTAGCTACTGTAAAACCTTGGGCCACAGGATTAAGCGGACAGCTTCAAAAAGCATTTGTGACAGTATACAAAGGGACTTTATCTAGCGGTGTTGAAATAGCTGTAGCCTCTGTTACAATCACCTCATCCAAGGATTGGTCAAAGACTTCAGAAGCCCAATTTAGGAAGAAGATAGATACATTATCAAAAATGAACCACAAGAATTTTGTAAATCTTCTTGGATATTGTGAAGAAGAGGAGCCTTTCACCAGAATGGTGATTTTTGAATATGCCCCAAACGGAACACTCTTTGAGCATTTGCACATACAAGAAGCTGAGCATTTGGATTGGGGAACAAGACTTAGAGTTGCCATGGGCATGGCTTACTGCTTGCAACATATGCACCACTTGGACCCTCCTATTGCTCACAGCAACCTCAATTCTTCAGCTGTCCAACTCACTGATGATTATGCTGCCAAATTAGCAGATCTGAGTTTCTTGAATGAAGTAGCTTCGGCCGAGATAAAATCCGGTGCTAGAAAACATGCTGACATTACATTAGCGAGCAACGTTTACAGCTTCGGAGTTATATTATTCGAAATGGTAACAGGCCAGCTCCCGTATTCAGATACCAGTTCTCTTGAAGACTGGGCATCACACTATTTGCAAGTGGGGGACCAGCCCCTCAAAGAAATGGTGGATCCAACTCTAGCATCTTTCGAAGAAGAAAAGCTTGAAGAAATTACTGCTTTGATTAAATCTTGTGTCCATCCTGATCCTGATAAGAGACCAACAATGAAAGAAGTTTGTGATAGATTGAGACAGACAACAAAGATAACACCCGAAGCAGCTGTTCCAAAACTTTCTCCACTTTGGTGGGCAGAGCTTGAGATTCATTCTGTGGATGCAAGCTGA 1914 0.4357 MSKNWKFCRFRDLRGVLRLLALCFVFQSFGLCCSLNQEGEALLKLKQGVVSDPFGALSSWVDDEVTVDPCNWLGVECLDGQVVVLNLKDLCLEGSLAPEFTNLVHIKSIILRNNSFYGIIPEGIVHLKELEVLDLGYNNFSGPLPADLGSNISLSTLLLDNNDLLGGFSPEVNRLNLLSESQVDENQLISADKRPTCTGRHITGYAIRHLSMSAKRKTVFGGCWYFVARGRMFIIEKQIHLALLHPLSHILLYIPLRPSPASASPQPDPPSPSPSPVQNPVSPNKNNSASPPTPLSPSPGIQHESTSSKSHRVAIVGGVIGGAVFLIVSSIGIYLCKTNKVATVKPWATGLSGQLQKAFVTVYKGTLSSGVEIAVASVTITSSKDWSKTSEAQFRKKIDTLSKMNHKNFVNLLGYCEEEEPFTRMVIFEYAPNGTLFEHLHIQEAEHLDWGTRLRVAMGMAYCLQHMHHLDPPIAHSNLNSSAVQLTDDYAAKLADLSFLNEVASAEIKSGARKHADITLASNVYSFGVILFEMVTGQLPYSDTSSLEDWASHYLQVGDQPLKEMVDPTLASFEEEKLEEITALIKSCVHPDPDKRPTMKEVCDRLRQTTKITPEAAVPKLSPLWWAELEIHSVDAS* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0384 637 Pfam Leucine rich repeat 105 164 IPR001611 GO:0005515
Dod04g0384 637 ProSiteProfiles Protein kinase domain profile. 341 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g0384 637 Gene3D Ribonuclease Inhibitor 33 213 IPR032675 -
Dod04g0384 637 MobiDBLite consensus disorder prediction 261 279 - -
Dod04g0384 637 SUPERFAMILY Protein kinase-like (PK-like) 359 606 IPR011009 -
Dod04g0384 637 Gene3D Phosphorylase Kinase; domain 1 352 430 - -
Dod04g0384 637 Pfam Leucine rich repeat N-terminal domain 36 77 IPR013210 -
Dod04g0384 637 PANTHER PROTEIN MALE DISCOVERER 2 361 637 - -
Dod04g0384 637 PANTHER PROTEIN MALE DISCOVERER 2 1 361 - -
Dod04g0384 637 SUPERFAMILY L domain-like 35 191 - -
Dod04g0384 637 Pfam Protein tyrosine and serine/threonine kinase 358 606 IPR001245 GO:0004672|GO:0006468
Dod04g0384 637 MobiDBLite consensus disorder prediction 261 307 - -
Dod04g0384 637 Gene3D Transferase(Phosphotransferase) domain 1 431 618 - -
Dod04g0384 637 PANTHER BNAA09G55080D PROTEIN 361 637 - -
Dod04g0384 637 PANTHER BNAA09G55080D PROTEIN 1 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0384 Dod-Chr4 5019663 5024516 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0384 20 606 Receptor kinase-like Gene Family AT2G42290 25.037 2.14e-35 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Dod04g0384 PK_Tyr_Ser-Thr 1.1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0384 - - gmx:100784541 819.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0384 04 5019663 5024516 Dod04g0384 04 5019663 5024516 ECH
Dod04g0384 04 5019663 5024516 Dod08g0667 08 7802739 7806555 PCT