Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0373 ATGCCAAAGAAAGCCATGAAGGGTTATGAGCCTCGTTCAAGCTCTTCTTGTGCAGCTTGCAAGTTATTGAAAAGGAGGTGCATACCCAATTGTATTTTTGCACCTTACTTCCGCTCTGATGAGTGCAAGAAGTTCGCCAAGGTGCACAAGGTGTTTGGAGCCAGCAATGTGAGCAAGATCCTCATAGAGGTGCCTGAAGAGCAAAGGGAGGACACGGTGAATTCCCTTGCCTATGAAGCAGAAGCAAGGCTTAGAGACCCGGTTTATGGATGCATTGGTGCCATAGCACTCTTGCAAAAGAAGATGGTGGAGCTTCAGCATGATCTTGCCATTGCTAAGGACCGCCTTGCTCGGTGCGCCGCCGCTTCTGCTTCTGCTTCTGCTTCTGATCATGATCCGCCATCTTCTGCGGCGAATATCATGCTTGCCCATGTTAGCTTGCCCCCTTTCCCTGACTCTTCCACCTGCAGTGATTTCAATGATAGCTTCTGCCACAGCTCTTCATCATCTCAATTATTGAGCCGACATGATCAAACGGTGGATGATTTCAATCAAATCCCATATATATTTTAA 573 0.4764 MPKKAMKGYEPRSSSSCAACKLLKRRCIPNCIFAPYFRSDECKKFAKVHKVFGASNVSKILIEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQKKMVELQHDLAIAKDRLARCAAASASASASDHDPPSSAANIMLAHVSLPPFPDSSTCSDFNDSFCHSSSSSQLLSRHDQTVDDFNQIPYIF* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0373 190 ProSiteProfiles LOB domain profile. 15 116 IPR004883 -
Dod04g0373 190 Coils Coil 95 115 - -
Dod04g0373 190 PANTHER LOB DOMAIN-CONTAINING PROTEIN 21 6 183 - -
Dod04g0373 190 Pfam Lateral organ boundaries (LOB) domain 16 113 IPR004883 -
Dod04g0373 190 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 6 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0373 Dod-Chr4 4946416 4947492 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0373 6 158 AS2 family AT3G11090 66.667 2.83e-66 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Dod04g0373 LOB 1.4e-37 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0373 04 4946416 4947492 Dod04g0373 04 4946416 4947492 ECH