Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0372 ATGGGAACATCTGTTCGTGTCAAAGAAGCCGTGGTGGTGACCCCTTCAGAGCCCACACCCACTGGAGTACTCCCTCTCTCAGCAATTGACTCCCAACTCTTCCTTCGCTTCACCATAGAGTACCTTCTGGTCTACAAGCCCGGCCCGGGCCTTGACCGGCCTGCCTCCGCGGCTCTTCTAAAAGCAGCATTGGCCAGAGCCCTGGTTCCTTACTACCCATTCTCAGGCAGGGTCAGGGCAAGGCCTGATGGGCTGGGCCTCGAGGTGGTGTGCCGGGCCCAGGGTGCAGTCTTCATCGAGGCCTTCTCGGACAAATTCACTGCCAACGACTTCGAAAAAGCGCCGAAAACAGTAACCCAATGGAGGAAGCTCTTGTCCCTCTACGTCACCGACGTCCTCAAGGGATCGCCGCCGCTCATCGTTCAGCTGACGTGGCTCTCCGACGGCGCCGCCGCGGTCGGCGTCGGGATCAACCACTGCCTCTGCGACGGGATCGGCAGCGCCGAGTTCCTCAACCACTTCGCCGAGTTAGCTTCCGGAAAACGCGGTCCGCACGCCGACCCTAAGCCCAAGCCCTCGCCAGCGAAAAAACCCACCCGCTTCAACCCGGCGAGTCATCATCACCACCCCGAGTTCAGCGGAGTCCCCGATCTCTGCGGGTTCATGAACCGGGTCACGAGCGGGCTCAGGCCCACCTCCATTGTCTTCGACAAGAGACGCATCGACGAACTCAAAGGGTTGGCTCGGTGCACGAGCGAGCCCAGCGAGTCGTTGACATCGTACACGTCTTTTGAGGTTCTGGCGGCTCACGTGTGGAGGAGTTGGGCCAGAGCATTGGCCTTTCCGCCGAACCAGATAGTAAAAATTCTTTTCAGCATCAATGTGCGGAACCGGGTCAAGCCGGGTATACCCGAGGGGTATTATGGGAACGCATTTGTTCTCGGGTGCGCGCAGAGTAGCGCGAGGGAGCTTGCGGAGAAAGGGGTCGGGTACGGGTCGGGTCTGGTAAAGGGGGCGAAGGAGAGGGTGGATGGGGAGCACGTGAGGAGGGTGAGTGAGTTGGTGTCCGAGTGGAGGGCGAGTCCTGACCCGGTTGGGGTGCTGATTTTGTCGCAGTGGTCTCGGTTGGGCCTGGGCCTGGAGAATGTTGAGCTCATGGGAAAGCCCGTTCACGTTGGGCCCGTATTGTGGGATAGGTACTGTTTGTTTCTTCCGGTGAGGGATGAGAGGGACAGTGTCAGGGTGGCGCTGGCTGTCCCCGCCGCCGCCGTTGATAACTACCACCGGTTTATCAGCGAATCGAATCTATGA 1311 0.598 MGTSVRVKEAVVVTPSEPTPTGVLPLSAIDSQLFLRFTIEYLLVYKPGPGLDRPASAALLKAALARALVPYYPFSGRVRARPDGLGLEVVCRAQGAVFIEAFSDKFTANDFEKAPKTVTQWRKLLSLYVTDVLKGSPPLIVQLTWLSDGAAAVGVGINHCLCDGIGSAEFLNHFAELASGKRGPHADPKPKPSPAKKPTRFNPASHHHHPEFSGVPDLCGFMNRVTSGLRPTSIVFDKRRIDELKGLARCTSEPSESLTSYTSFEVLAAHVWRSWARALAFPPNQIVKILFSINVRNRVKPGIPEGYYGNAFVLGCAQSSARELAEKGVGYGSGLVKGAKERVDGEHVRRVSELVSEWRASPDPVGVLILSQWSRLGLGLENVELMGKPVHVGPVLWDRYCLFLPVRDERDSVRVALAVPAAAVDNYHRFISESNL* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0372 436 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 6 430 - -
Dod04g0372 436 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 6 430 - -
Dod04g0372 436 Gene3D - 223 431 IPR023213 -
Dod04g0372 436 Pfam Transferase family 4 424 - -
Dod04g0372 436 MobiDBLite consensus disorder prediction 180 194 - -
Dod04g0372 436 MobiDBLite consensus disorder prediction 180 209 - -
Dod04g0372 436 Gene3D - 1 214 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0372 Dod-Chr4 4924956 4926294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0372 5 433 Monolignol Biosynthesis Gene Families AT5G48930 25.792 1.13e-40 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0372 - - gmx:100803812 614.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0372 04 4924956 4926294 Dod04g0372 04 4924956 4926294 ECH
Dod04g0372 04 4924956 4926294 Dod08g0674 08 7846973 7849487 PCT