Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0369 ATGGCCAAAATCAATTGTCACTTTGACCAATCAAAGGTTGTTTCACATCACACCAATCGCCATCAAGATAAGAAGAAGATCACACCCCCATTATTAGTGCAGCAAACAGTGGCTGCGGATGGGGAAGATAATAAAAAGCTCAGAAAGCATTGGAGAAACTTTAGAATATGGTTCACATTTGTGATAATATATGATATGGAAAATTGCTACAATAATAATTCTGGCTGGCACCTTGCCACAACCTTTGCTCAATGCAGTGATCATCATCATCATTCTCCCTTTTTAATCCCTCCACAAACACTGCCTCATCCATGGCCATTACCCATTGAAGAAATGGCTGCAGAAGATAGAGCTGCAAGTGCTTCCAAGAGCCACAGTCAAGCAGAGAAACGGCGCAGAGACAGGATCAATGCACAGCTTGCAAGTCTCAGAAAACTGATTCCCAAGTCTGATAAGATGGACAAGGCAGCTTTACTAGGAAGTGTGATAGAGCATGTCAAAGAGCTAAAGCGAAAAGCAATGGATGTTAGCAGAGCCATCACAGTTCCAACTGAAACTGATGAGGTGACAATTGAGTATGATCCTGTTCTAGATGAGAGCTTCATCACCAATAATGCAACCAAGTTCAAGGACCGTATTGTCATCAAAGCTTCTGTTTGCTGTGATGATCGACCAGAACTGTTCTCTGAACTCATCCAGGTCCTCAAAGGCTTGAGACTCACTGCTGTTAAAGCTGACATAGCCAGTGTCGGTGGCAGAATCAAAAGCATATTTTTGCTTTGTTCTAAGGATACTGAAGAGGGTAGTGTTTGCCTTAGCACTCTCAAACATTCCCTTAAATCAGTTGTGACCAAAATTGCTTCATCATCCATGGCATCAACTTGTCCTACTAGAAGTAAGAGGCAGAGATTCTTCTTACCTTCTCATTGCATACAGTAA 939 0.4207 MAKINCHFDQSKVVSHHTNRHQDKKKITPPLLVQQTVAADGEDNKKLRKHWRNFRIWFTFVIIYDMENCYNNNSGWHLATTFAQCSDHHHHSPFLIPPQTLPHPWPLPIEEMAAEDRAASASKSHSQAEKRRRDRINAQLASLRKLIPKSDKMDKAALLGSVIEHVKELKRKAMDVSRAITVPTETDEVTIEYDPVLDESFITNNATKFKDRIVIKASVCCDDRPELFSELIQVLKGLRLTAVKADIASVGGRIKSIFLLCSKDTEEGSVCLSTLKHSLKSVVTKIASSSMASTCPTRSKRQRFFLPSHCIQ* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0369 312 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 121 173 IPR036638 GO:0046983
Dod04g0369 312 MobiDBLite consensus disorder prediction 115 134 - -
Dod04g0369 312 PANTHER TRANSCRIPTION FACTOR BHLH51 102 310 - -
Dod04g0369 312 CDD bHLH_AtAIG1_like 115 191 - -
Dod04g0369 312 PANTHER TRANSCRIPTION FACTOR BHLH30 102 310 IPR045847 GO:0003700|GO:0006355
Dod04g0369 312 Pfam Helix-loop-helix DNA-binding domain 123 169 IPR011598 GO:0046983
Dod04g0369 312 Gene3D - 114 177 IPR036638 GO:0046983
Dod04g0369 312 SMART finulus 126 175 IPR011598 GO:0046983
Dod04g0369 312 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 120 169 IPR011598 GO:0046983
Dod04g0369 312 MobiDBLite consensus disorder prediction 116 134 - -
Dod04g0369 312 CDD ACT_UUR-ACR-like 218 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0369 Dod-Chr4 4889685 4891345 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0369 116 309 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G40200 48.241 5.12e-49 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dod04g0369 HLH 1.7e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0369 - - gmx:100799687 358.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0369 04 4889685 4891345 Dod04g0369 04 4889685 4891345 ECH
Dod04g0369 04 4889685 4891345 Dod08g0679 08 7920533 7922399 PCT