Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0358 ATGATGAAACAACCTTCCTTCTCCTCCACCTTCTCTCTCTTCGCCACCGCCACATTCATATTCATATTCTCTCTGATACCCTCTTCCCATGCTTTCGGCTCCGGCGCCACCCTCGCCGTCACCGACGCCTTCGCCACCGTCTGCGGAGTCGTTGCCCGCGAGGCCACCCAGCGCATTGAGTGCTACCGCCTCGGCCAGCTCCTCCCCATCGCCCCCAACGTTTCCTTCTCCGCCGTCTCTGGCGGCGGCACCTTCTTCTGCGGCCTGAGGTCCGGCAACTACACCTTGCATTGCTGGGACACCACCGCCACCACCAACGGAACGTTCACAAGGAAGAGACTTTACAACGACCACACCGTTTTGTTGGAGAATCTCTCCGTCGGGGAAACCCACGTTTGCACCACCGTGGTCGGTGTAGGAACCGTGAAATGCTGGAGATTCAATAACCAAACTTTCGAATTGCCACAAAGAACGCTTAACTTCTCTTCGATCTCATCTGGGTCTAGATTCTCTTGCGGGATTCTGAAGGAGAGTTCTTTGGTGAGGTGTTGGGGTGAAAGGGTAGTTTCACGTAGGATAGAGAATTGGTTTGGGAGCATGACTATGTTTAGTGTTGTGGCTGGTGGTTCACAAGTTTGTGGGTTGAATTCAACGGGGTTTTTGGTTTGCAGCGGGAATAATAGTAGTAACAGTAATGATAACAGTTTTGGGGAGGTTGGTGTTCCTGAAGGTGGGGCTTGGGAATTTGGTGGGTTGGCACTTGGAGCTAGCCATGGATGTGCGATCAGAAGAACGAATGGTAGTGTTGTTTGTTGGGGTGGGAATGAACAATTCAATGTGAATGCAACAAAAGGTGTTTCCTTTGAGTTGATTGTTTCTGGGTCTAACTTCACTTGTGGATTGGTAACGAGTAATCTCACAGTTCTGTGTTGGGGTTCTGGTTGGCCTAATAATGGTTCTGGTTCAAGGTTTGGGCTTTCTTTGCCTAGGATTCTTCCTGGGTCTTGTGTTCAATCTTCTTGTGGTGAGTGTGGTTCATATCTTGATTCTCAGAATTTATGTTCTGGCTCTGGTAACATTTGTAAGCCTTGTTGGCCTCAAGGACTAGCGCCGCCACCGCAGCCTCCACCGCCATCAATACCGATTACACCACCTCCGGCAGTCCCTCCTCCGCCGAGGTCTCGTTCAAAGACCTTGACAAGGGGTTTGTTGGCATTTGCCATTGTGGGATCAGTGGGAGCTTTTGCTGGTATTTGCACAATAGTTTATTGCTTGTGGAATGGAGTTTGTTTGGGGAAGAAGAAAGTTCATAATTCAGTGCAACCCACAATTACAAGAGGTGGTAGTAGTTCCAATAGTGGGAGTGCTTCCAGTAAAAGCAATCTTTCGAGATCATCCACAATTAGGCGTCAGGGTTCGAGGATAATGAGGCGCCAGAGGAGTGGAACCTCGTCGTTGAAACACCCTGATAGGGCTGAGGAGTTCACCTTGGCTGAGCTTGTAGCAGCCACCAACAATTTCTCGCTCGAGAACAAGATTGGTGCCGGAAGTTTCGGTGTTGTGTACAAGGGCAAACTCGCCGATGGTCGTGAAGTGGCGATCAAGAGGGGTGAGACTGGGTCCAAGACGAAGAGGTTTCAAGAGAAAGAGAGCGCATTTCAGTCTGAATTGTCCTTCTTGTCACGCCTACACCACAAGCACTTGGTTAGGCTGGTTGGTTTCTGTGAGGAGAAAGATGAGAGGTTATTGGTGTATGATTACATGAAGAATGGGGCATTATATGATCATTTGCATGCCAAGAACAATGTGGACAAGAGTAGCAGTTTCTTGAATTCATGGAAAATGAGGATCAAAATTGCTTTGGATGCTGCCCGCGGAATAGAGTATCTCCACAACTATGCAGTTCCATCCATAATTCACAGAGACATCAAGTCTTCTAACATTCTTCTCGATTCGAATTGGACGGCGAGAGTATCTGATTTTGGATTGTCAATGATGAGTCCTGAGCCTGACCACGATCACCGGCCAATGAAGGCAGCAGGAACGGTTGGATACATTGATCCTGAGTACTATGGTCTAAATGTATTGACAGCAAAGAGTGATGTCTATGGCCTAGGAGTGGTGCTGCTAGAACTTCTAACTGGAAAGAGAGCCATATTCAAGAATGGTGAAGATGGAGGCACCCCAATAAGTGTGGTAGACTTTGCAGTGCCTGCTATTATGGCTGAAGAGTTGGTGAAGATTTTGGACCCCAGGGTTGGACCACCAGAGGTGAATGAAGCTGAGGCTGTGGAGTTAGTAGCCTATATTGCTTTGAATTGTGTCAATTTGGAAGGTAAAGATAGACCAACAATGGCTGACATTGTGGACAATTTGGAGAGGGCTTTGGCAATTTGTGATAGCAGCCATGCCAGCATTTCCAGTGGTATAATCTCCATTGCTTCAGATTGA 2451 0.4818 MMKQPSFSSTFSLFATATFIFIFSLIPSSHAFGSGATLAVTDAFATVCGVVAREATQRIECYRLGQLLPIAPNVSFSAVSGGGTFFCGLRSGNYTLHCWDTTATTNGTFTRKRLYNDHTVLLENLSVGETHVCTTVVGVGTVKCWRFNNQTFELPQRTLNFSSISSGSRFSCGILKESSLVRCWGERVVSRRIENWFGSMTMFSVVAGGSQVCGLNSTGFLVCSGNNSSNSNDNSFGEVGVPEGGAWEFGGLALGASHGCAIRRTNGSVVCWGGNEQFNVNATKGVSFELIVSGSNFTCGLVTSNLTVLCWGSGWPNNGSGSRFGLSLPRILPGSCVQSSCGECGSYLDSQNLCSGSGNICKPCWPQGLAPPPQPPPPSIPITPPPAVPPPPRSRSKTLTRGLLAFAIVGSVGAFAGICTIVYCLWNGVCLGKKKVHNSVQPTITRGGSSSNSGSASSKSNLSRSSTIRRQGSRIMRRQRSGTSSLKHPDRAEEFTLAELVAATNNFSLENKIGAGSFGVVYKGKLADGREVAIKRGETGSKTKRFQEKESAFQSELSFLSRLHHKHLVRLVGFCEEKDERLLVYDYMKNGALYDHLHAKNNVDKSSSFLNSWKMRIKIALDAARGIEYLHNYAVPSIIHRDIKSSNILLDSNWTARVSDFGLSMMSPEPDHDHRPMKAAGTVGYIDPEYYGLNVLTAKSDVYGLGVVLLELLTGKRAIFKNGEDGGTPISVVDFAVPAIMAEELVKILDPRVGPPEVNEAEAVELVAYIALNCVNLEGKDRPTMADIVDNLERALAICDSSHASISSGIISIASD* 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0358 816 Gene3D Transferase(Phosphotransferase) domain 1 588 807 - -
Dod04g0358 816 MobiDBLite consensus disorder prediction 372 393 - -
Dod04g0358 816 Pfam Protein kinase domain 508 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g0358 816 SUPERFAMILY Protein kinase-like (PK-like) 485 792 IPR011009 -
Dod04g0358 816 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 2 812 IPR044815 GO:0004674
Dod04g0358 816 ProSitePatterns Protein kinases ATP-binding region signature. 513 535 IPR017441 GO:0005524
Dod04g0358 816 SMART serkin_6 507 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g0358 816 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 2 812 - -
Dod04g0358 816 SUPERFAMILY RCC1/BLIP-II 30 280 IPR009091 -
Dod04g0358 816 ProSitePatterns Serine/Threonine protein kinases active-site signature. 638 650 IPR008271 GO:0004672|GO:0006468
Dod04g0358 816 MobiDBLite consensus disorder prediction 372 396 - -
Dod04g0358 816 ProSiteProfiles Protein kinase domain profile. 507 806 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g0358 816 MobiDBLite consensus disorder prediction 442 470 - -
Dod04g0358 816 Gene3D Phosphorylase Kinase; domain 1 467 587 - -
Dod04g0358 816 MobiDBLite consensus disorder prediction 442 488 - -
Dod04g0358 816 Gene3D - 28 200 IPR009091 -
Dod04g0358 816 Gene3D - 201 366 IPR009091 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0358 Dod-Chr4 4700571 4703635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0358 10 816 Receptor kinase-like Gene Family AT3G55950 59.831 0.0 853
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Dod04g0358 Pkinase 6.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0358 - - gmx:100805573 1081.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0692 08 8114583 8117293 Dod04g0358 04 4700571 4703635 ECH
Dod04g0358 04 4700571 4703635 Dod04g0358 04 4700571 4703635 ECH