Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0345 ATGGCCGCCGTCGGCGCCGCCGCCACGTCATACTTCTTCGGCACCCGCCTCACCAACCCAACCACCCCATATTCCGGAAGGTTCCACGCCTTCTTCAACCTCGGCATAAAGAAGGCACCACCATCACCGCCACAGAAGAAGAAGGAGCCGGCGAAGCCCAAACGCTCCGCCTCCGGGGACCGCCTAGTGTGGCTCCCCGGCGCCGAGCCGCCGGAATGGCTTGACGGCTCGATGATCGGCGACCGTGGGTTCGACCCGCTCGGGTTCGCGAAGCCAGCAGAGTACCTTCAGTTCGAACTCGACTCGCTCGACCAGAACCTAGCGAAGAACGTCGCCGGCGACATCATCGGAACTAGGATCGAGGCCGTGGAGGTCCAACCGACGCCGTTTCAGCCCTACACGGAGGTCTTCGGGATCCAGAGGTTCCGCGAGTGCGAGCTCATACATGGAAGGTGGGCAATGCTGGGTGCTCTCGGCGCCCTTGCGGTTGAAGCACTCACTGGTGTCGCGTGGCAAGACGCCGGAAAGGTAGAGCTGGTAGAAGGGGCATCCTACTTGGGACTTCCTCTTCCATTCTCATTGACCACATTGATCTGGATTGAGGTTATATTGATTGGCTACATTGAATTCCAAAGAAATGCAGAGCTTGACCCAGAGAAAAGGTTATACCCAGGAGGCAAGTTCTTTGATCCGCTTGGATTGGCCAATGACCCTGAAGAGAGGGCCAGGCTTCAACTAGCTGAGATCAAGCACTCCCGCTTAGCCATGGTGGTCTTCCTCATCTTTGCAATTCAAGCTGCTGCAACAGGAAAAGGCCCTATCAGTTTCATTGCTACCTTCAACAAATGA 849 0.5701 MAAVGAAATSYFFGTRLTNPTTPYSGRFHAFFNLGIKKAPPSPPQKKKEPAKPKRSASGDRLVWLPGAEPPEWLDGSMIGDRGFDPLGFAKPAEYLQFELDSLDQNLAKNVAGDIIGTRIEAVEVQPTPFQPYTEVFGIQRFRECELIHGRWAMLGALGALAVEALTGVAWQDAGKVELVEGASYLGLPLPFSLTTLIWIEVILIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEERARLQLAEIKHSRLAMVVFLIFAIQAAATGKGPISFIATFNK* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0345 282 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 282 IPR001344 GO:0009765|GO:0016020
Dod04g0345 282 Gene3D Chlorophyll a/b binding protein domain 62 282 - -
Dod04g0345 282 MobiDBLite consensus disorder prediction 38 61 - -
Dod04g0345 282 MobiDBLite consensus disorder prediction 42 56 - -
Dod04g0345 282 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP29.3, CHLOROPLASTIC 1 282 - -
Dod04g0345 282 SUPERFAMILY Chlorophyll a-b binding protein 58 279 - -
Dod04g0345 282 Pfam Chlorophyll A-B binding protein 70 266 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0345 Dod-Chr4 4540450 4543730 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0345 13 279 Chloroplast and Mitochondria Gene Families AT3G08940 68.539 2.01e-133 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0345 K08915 - gmx:100820335 459.144