Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0334 ATGGAAGAGGGCATGTTAGGATTTTGCAATAGAGCTGGAAGTGTACGTGGTAACTTCAGTGGCAGCACTGGAGGCACCAAGTGTGGGCGTTGGAACCCCACTACTGAACAGGTTAAGGTTCTTACTGAACTGTTCAGTTCTGGACTCAGAACCCCAAGCACTGATCAGATTCAAAAGATCTCCACTCAGCTGAGTTTTTATGGTAAAATTGAGAGCAAGAATGTGTTCTATTGGTTTCAGAACCATAAGGCTAGGGAAAGACAGAAGCGTCGAAAGGTCCCCTTTGATGATACAATGAATTCTTCTACACAAAGTCTTGCACAGCTGTATCAGGTTTCGGAGCCTGAGAGGGTGATTGAGACTCTTCAACTCTTTCCCTTGAACTCCGTTGGTGAATCAGATCCAGAGAAGCTGAGGGTGCATGCAAATGAATGCAGGGATTGTGATATGTTTTCATACACAATGGGGGAACAATTGGATCACCCACCATTAGACCTTCGCTTAAGTTTTATGTAA 516 0.4438 MEEGMLGFCNRAGSVRGNFSGSTGGTKCGRWNPTTEQVKVLTELFSSGLRTPSTDQIQKISTQLSFYGKIESKNVFYWFQNHKARERQKRRKVPFDDTMNSSTQSLAQLYQVSEPERVIETLQLFPLNSVGESDPEKLRVHANECRDCDMFSYTMGEQLDHPPLDLRLSFM* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0334 171 CDD homeodomain 30 90 IPR001356 GO:0003677
Dod04g0334 171 SUPERFAMILY Homeodomain-like 29 92 IPR009057 -
Dod04g0334 171 SMART HOX_1 26 93 IPR001356 GO:0003677
Dod04g0334 171 Pfam Homeodomain 28 88 IPR001356 GO:0003677
Dod04g0334 171 PANTHER WUSCHEL-RELATED HOMEOBOX 7 1 160 - -
Dod04g0334 171 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 160 IPR044555 GO:0003700|GO:0099402
Dod04g0334 171 ProSiteProfiles 'Homeobox' domain profile. 24 89 IPR001356 GO:0003677
Dod04g0334 171 Gene3D - 27 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0334 Dod-Chr4 4354345 4355009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0334 6 171 Wox Gene Family AT3G11260 54.645 3.30e-61 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Dod04g0334 Homeodomain 2.7e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0334 - - pvu:PHAVU_008G226100g 269.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0334 04 4354345 4355009 Dod04g0334 04 4354345 4355009 ECH
Dod04g0334 04 4354345 4355009 Dod08g0714 08 8573968 8574884 PCT